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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:66.5TPM
GTEx:11.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA006923

 

Antibody HPA048368

 

Antibody CAB022545

 

Endothelial cells

Low   Medium   Medium  

Glial cells

Not detected   Not detected   Medium  

Neuronal cells

Medium   Not detected   Medium  

Neuropil

Not detected   Not detected   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

66.5

N/A Male, age 5
Sample 1
TPM: 61.7
overview Female, age 40
Sample 2
TPM: 71.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 65.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 10.3
Samples: 114

Max RPKM: 15.7
Min RPKM: 5.9
Std RPKM: 1.4
Median RPKM: 10
GTEX-QMR6-1426-SM-32PLA 15.7
GTEX-13FHO-3026-SM-5J1O9 15.3
GTEX-QDT8-2926-SM-32PKC 14.4
GTEX-QVUS-2826-SM-3GADB 13.1
GTEX-PVOW-2526-SM-2XCF7 12.9
GTEX-RNOR-2326-SM-2TF4I 12.9
GTEX-ZAK1-3026-SM-5S2MJ 12.8
GTEX-11WQK-3026-SM-5EQL6 12.6
GTEX-WZTO-2926-SM-3NM9I 12.3
GTEX-TSE9-3026-SM-3DB76 12.1
GTEX-11NUK-2926-SM-5A5MD 11.9
GTEX-144FL-3026-SM-5O99C 11.9
GTEX-QVJO-1426-SM-2S1QY 11.9
GTEX-T2IS-3026-SM-32QPM 11.9
GTEX-WVLH-3026-SM-3MJG9 11.9
GTEX-XLM4-3026-SM-4AT6L 11.9
GTEX-13OVJ-2826-SM-5L3GW 11.8
GTEX-T5JC-2426-SM-3NMDB 11.8
GTEX-WHSE-3026-SM-3P5ZH 11.6
GTEX-ZUA1-3026-SM-59HJC 11.6
GTEX-132Q8-3026-SM-5PNVG 11.5
GTEX-14A5I-2926-SM-5Q5CQ 11.5
GTEX-14BMV-3026-SM-5S2PQ 11.5
GTEX-UTHO-3026-SM-3GAFB 11.5
GTEX-13JVG-3126-SM-5L3FH 11.3
GTEX-X585-3026-SM-46MWF 11.3
GTEX-ZZPT-3026-SM-5GZXH 11.3
GTEX-12ZZZ-3026-SM-5BC67 11.2
GTEX-13X6K-2926-SM-5Q5D5 11.2
GTEX-NPJ8-1526-SM-2D7VU 11.2
GTEX-R55F-1326-SM-5S2V4 11.1
GTEX-13NYC-2826-SM-5K7WR 11.0
GTEX-NPJ7-2726-SM-2I3FT 10.9
GTEX-11DXY-3226-SM-5GIDE 10.7
GTEX-13VXU-2926-SM-5LU5C 10.7
GTEX-WL46-2926-SM-3LK82 10.7
GTEX-WWYW-3126-SM-3NB39 10.7
GTEX-111FC-3126-SM-5GZZ2 10.6
GTEX-X4XX-3026-SM-3NMB2 10.6
GTEX-145MH-3026-SM-5Q5DZ 10.5
GTEX-12ZZY-3026-SM-5GCOU 10.4
GTEX-131YS-3126-SM-5KLYT 10.4
GTEX-13PL6-3126-SM-5LUAR 10.4
GTEX-144GL-3026-SM-5Q5CW 10.4
GTEX-OXRN-2426-SM-2I5EQ 10.4
GTEX-ZYFD-3026-SM-5E44C 10.4
GTEX-1399T-3026-SM-5KLZC 10.3
GTEX-13OW6-3026-SM-5J2MI 10.3
GTEX-145MG-3026-SM-5RQJA 10.3
GTEX-T6MN-2626-SM-32PMQ 10.3
GTEX-ZVT3-3026-SM-5E43N 10.3
GTEX-11OF3-2926-SM-5HL78 10.2
GTEX-12ZZX-2926-SM-5GCOQ 10.2
GTEX-13FLW-1426-SM-5K7YE 10.2
GTEX-14ASI-3026-SM-5S2PN 10.2
GTEX-11O72-2926-SM-5BC4V 10.1
GTEX-11GSO-2926-SM-5HL73 10.0
GTEX-13OVH-3026-SM-5MR4N 10.0
GTEX-145LS-3126-SM-5Q5BY 10.0
GTEX-PWO3-0926-SM-2I5EY 10.0
GTEX-RU72-3026-SM-5SI7Y 10.0
GTEX-XOTO-3026-SM-4B65M 10.0
GTEX-1128S-2726-SM-5H12C 9.9
GTEX-1192X-3126-SM-5N9BY 9.9
GTEX-13FHP-3026-SM-5IJBS 9.9
GTEX-13FXS-3126-SM-5J2NN 9.9
GTEX-Y8DK-0826-SM-4TT3T 9.8
GTEX-Z93S-2926-SM-57WB9 9.8
GTEX-11OC5-0726-SM-5P9JK 9.7
GTEX-11DXW-1126-SM-5H12Q 9.6
GTEX-12WSC-3026-SM-5GCNF 9.6
GTEX-13QIC-2926-SM-5J2NF 9.6
GTEX-Q2AG-2926-SM-2HMJ3 9.6
GTEX-YFC4-3126-SM-5PNV6 9.6
GTEX-11PRG-2926-SM-5987A 9.5
GTEX-12126-1026-SM-5P9JJ 9.5
GTEX-12WSA-2926-SM-5EQ4D 9.5
GTEX-13NYS-3126-SM-5KLYV 9.5
GTEX-13O3O-3126-SM-5KM3H 9.5
GTEX-13O3Q-2926-SM-5KM45 9.5
GTEX-11GSP-3226-SM-5986O 9.4
GTEX-13IVO-2926-SM-5L3CZ 9.4
GTEX-13OW8-2826-SM-5L3GC 9.4
GTEX-1445S-3026-SM-5O9BR 9.4
GTEX-ZE7O-3126-SM-5HL5X 9.4
GTEX-11ONC-2926-SM-5P9JM 9.3
GTEX-12WSD-3126-SM-5HL7P 9.3
GTEX-145MF-2726-SM-5O995 9.3
GTEX-N7MT-1126-SM-5SI7V 9.3
GTEX-13G51-3026-SM-5IJB8 9.2
GTEX-13OW7-3026-SM-5L3GY 9.2
GTEX-13PVQ-3026-SM-5SI93 9.2
GTEX-11EI6-3026-SM-5GZZO 9.1
GTEX-13NYB-3026-SM-5IJD7 9.1
GTEX-13S7M-3126-SM-5RQJQ 9.0
GTEX-Y111-2726-SM-4TT3N 8.9
GTEX-1117F-3226-SM-5N9CT 8.8
GTEX-11TTK-2926-SM-5PNYP 8.8
GTEX-117XS-3026-SM-5N9CA 8.7
GTEX-13JUV-2926-SM-5LZX7 8.7
GTEX-11GS4-3126-SM-5A5LH 8.6
GTEX-12WSH-3026-SM-5CVNI 8.6
GTEX-12ZZW-2926-SM-5LZUP 8.6
GTEX-1313W-3126-SM-5LZUI 8.6
GTEX-13SLX-3126-SM-5S2Q5 8.6
GTEX-13X6J-3026-SM-5Q5CU 8.6
GTEX-11ZUS-2926-SM-5FQSL 8.4
GTEX-139T8-1026-SM-5J2MC 8.4
GTEX-131XW-3126-SM-5LZUC 8.3
GTEX-YJ89-3026-SM-5IFJI 8.3
GTEX-11EMC-3226-SM-5EGKW 8.1
GTEX-147GR-3026-SM-5S2ML 8.0
GTEX-ZAJG-3126-SM-5HL9J 7.4
GTEX-11NV4-2126-SM-5N9DS 5.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 11.8
Samples: 108

Max RPKM: 18.8
Min RPKM: 6.6
Std RPKM: 2.3
Median RPKM: 11.5
GTEX-QDT8-0011-R10A-SM-32PKG 18.8
GTEX-13N2G-0011-R10a-SM-5MR34 17.9
GTEX-P44H-0011-R10A-SM-2XCEK 17.9
GTEX-QMR6-0011-R10A-SM-32PKO 17.9
GTEX-QVUS-0011-R10A-SM-3GIK3 16.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 16.3
GTEX-13FHO-0011-R10b-SM-5J2MM 15.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 15.1
GTEX-WL46-0011-R10A-SM-3MJFQ 15.1
GTEX-WVLH-0011-R10A-SM-3MJFM 15.1
GTEX-S7SE-0011-R10A-SM-2XCDF 15.0
GTEX-T6MN-0011-R10A-SM-32QP7 14.8
GTEX-13X6K-0011-R10a-SM-5P9JR 14.6
GTEX-X4EP-0011-R10B-SM-4QASJ 14.5
GTEX-WWYW-0011-R10A-SM-3NB35 13.8
GTEX-YFC4-0011-R10a-SM-4SOK5 13.7
GTEX-11H98-0011-R10b-SM-5NQ98 13.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 13.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 13.4
GTEX-N7MS-0011-R10A-SM-2HMJK 13.4
GTEX-X585-0011-R10A-SM-46MUY 13.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 13.3
GTEX-145MG-0011-R10a-SM-5PNWG 13.3
GTEX-12WSD-0011-R10b-SM-5GU79 13.2
GTEX-T5JC-0011-R10A-SM-32PM2 13.2
GTEX-XLM4-0011-R10A-SM-4AT5P 13.2
GTEX-14BIL-0011-R10a-SM-5SI75 13.1
GTEX-13CZV-0011-R10b-SM-5LZYD 12.9
GTEX-145MH-0011-R10b-SM-5PNUK 12.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 12.8
GTEX-WZTO-0011-R10B-SM-4E3KB 12.8
GTEX-13O3Q-0011-R10b-SM-5KM39 12.7
GTEX-131XH-0011-R10a-SM-5EGLJ 12.6
GTEX-12WSE-0011-R10b-SM-5P9JV 12.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 12.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 12.4
GTEX-13FLW-0011-R10b-SM-5LZZF 12.4
GTEX-13QIC-0011-R10a-SM-5O9C7 12.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 12.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 12.2
GTEX-N7MT-0011-R10A-SM-2I3E1 12.0
GTEX-YJ89-0011-R10a-SM-4SOK9 12.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 12.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 12.0
GTEX-14BIN-0011-R10a-SM-5S2UA 11.9
GTEX-TSE9-0011-R10A-SM-3DB7O 11.9
GTEX-13SLW-0011-R10a-SM-5S2UI 11.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 11.8
GTEX-12WSF-0011-R10a-SM-5LZVH 11.7
GTEX-13O3O-0011-R10a-SM-5LUA9 11.7
GTEX-RVPU-0011-R10A-SM-2XCAH 11.6
GTEX-12WSM-0011-R10a-SM-5DUWV 11.5
GTEX-13JUV-0011-R10b-SM-5LZXR 11.5
GTEX-13N1W-0011-R10b-SM-5MR4H 11.5
GTEX-13JVG-0011-R10b-SM-5KM2P 11.4
GTEX-1445S-0011-R10a-SM-5PNWB 11.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 11.4
GTEX-13QJC-0011-R10a-SM-5SI63 11.3
GTEX-13S7M-0011-R10b-SM-5PNZB 11.3
GTEX-X4XX-0011-R10B-SM-46MWO 11.3
GTEX-Z93S-0011-R10a-SM-4RGNM 11.3
GTEX-11WQK-0011-R10a-SM-5BC6R 11.2
GTEX-13OW6-0011-R10a-SM-5L3HE 11.2
GTEX-13X6I-0011-R10a-SM-5PNWI 11.2
GTEX-OXRN-0011-R10A-SM-2I5GC 11.2
GTEX-131YS-0011-R10b-SM-5EQ5N 11.1
GTEX-12WSA-0011-R10b-SM-5P9ET 11.0
GTEX-1313W-0011-R10b-SM-5DUXA 11.0
GTEX-13NYB-0011-R10a-SM-5KM43 11.0
GTEX-13OVL-0011-R10a-SM-5L3GS 11.0
GTEX-12126-0011-R10b-SM-5BC6T 10.9
GTEX-12WSC-0011-R10a-SM-5GU57 10.9
GTEX-NL4W-0011-R10A-SM-2I3DY 10.9
GTEX-11ZUS-0011-R10b-SM-5BC79 10.8
GTEX-13FXS-0011-R10a-SM-5J2MA 10.8
GTEX-147F4-0011-R10b-SM-5S2WC 10.8
GTEX-NL3H-0011-R10A-SM-2I3E9 10.8
GTEX-ZUA1-0011-R10a-SM-51MT6 10.8
GTEX-13NYS-0011-R10a-SM-5MR4S 10.7
GTEX-147GR-0011-R10b-SM-5S2UM 10.7
GTEX-13X6J-0011-R10b-SM-5PNWA 10.6
GTEX-13SLX-0011-R10a-SM-5P9HV 10.5
GTEX-12WSH-0011-R10a-SM-5LZUS 10.4
GTEX-13OW7-0011-R10a-SM-5L3H3 10.3
GTEX-145LS-0011-R10a-SM-5PNUQ 10.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 10.0
GTEX-13OW8-0011-R10a-SM-5L3H6 10.0
GTEX-145LU-0011-R10a-SM-5PNWJ 10.0
GTEX-XMD1-0011-R10A-SM-4AT4A 9.9
GTEX-ZVT3-0011-R10b-SM-57WB6 9.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 9.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 9.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 9.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 9.5
GTEX-139TS-0011-R10a-SM-5K7TU 9.4
GTEX-ZF28-0011-R10a-SM-4WWEH 9.4
GTEX-ZV68-0011-R10a-SM-51MT7 9.4
GTEX-X261-0011-R10B-SM-4E3JT 9.3
GTEX-11WQC-0011-R10a-SM-57WCT 9.0
GTEX-13G51-0011-R10b-SM-5LZYF 8.9
GTEX-OXRO-0011-R10A-SM-2I5EH 8.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 8.6
GTEX-13NZA-0011-R10b-SM-5KM54 8.0
GTEX-1477Z-0011-R10b-SM-5S2RF 7.4
GTEX-14753-0011-R10b-SM-5S2WE 7.3
GTEX-ZXG5-0011-R10a-SM-57WDD 7.1
GTEX-13IVO-0011-R10a-SM-5LZY3 6.8
GTEX-131XW-0011-R10a-SM-5DUVA 6.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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