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Gene name

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Method

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Detectable

Category

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Score

Score

Antibodies

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PAFAH1B3
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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.9TPM
GTEx:12.6RPKM
FANTOM5:14.5Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:Medium
 

Antibody staining

Antibody HPA035639

 

Cells in glomeruli

Not detected  

Cells in tubules

Medium  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

8.9

overview Female, age 58
Sample 1
TPM: 14.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 9.3
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 15.8
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 9.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 2.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 6.6
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 8.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 9.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 4.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

12.6

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 12.6
Samples: 32

Max RPKM: 25
Min RPKM: 2.7
Std RPKM: 4.8
Median RPKM: 11.8
GTEX-ZYT6-2226-SM-5GIC9 25.0
GTEX-QLQW-1626-SM-4R1K1 22.8
GTEX-13112-2126-SM-5GCO4 20.5
GTEX-ZLFU-0926-SM-5P9F8 17.9
GTEX-UPIC-1126-SM-4IHLO 17.7
GTEX-N7MS-1626-SM-3LK5F 16.5
GTEX-XPVG-0526-SM-4B65N 15.6
GTEX-1399S-0526-SM-5IJG8 15.4
GTEX-145MN-0326-SM-5QGQI 15.0
GTEX-QDVN-1626-SM-48TZC 14.6
GTEX-12696-0926-SM-5FQTV 14.5
GTEX-13OVL-1826-SM-5KLZR 14.0
GTEX-12WSG-0826-SM-5EQ5A 13.6
GTEX-ZVZP-0926-SM-5GIDB 13.2
GTEX-ZYFG-1626-SM-5GZYY 12.9
GTEX-13RTJ-2226-SM-5S2Q1 12.2
GTEX-RN64-1626-SM-48FD7 11.4
GTEX-147F4-2626-SM-5Q5CS 11.3
GTEX-11GS4-2326-SM-5A5KS 11.3
GTEX-11OF3-1326-SM-5N9FJ 11.1
GTEX-Y5V6-2026-SM-5IFHO 10.6
GTEX-13NYB-1726-SM-5N9G2 10.4
GTEX-P4QS-1126-SM-3NMD5 9.7
GTEX-1497J-0826-SM-5NQAJ 9.0
GTEX-ZC5H-1726-SM-5HL7X 9.0
GTEX-13OVI-1126-SM-5KLZF 9.0
GTEX-11TTK-1926-SM-5PNW8 8.8
GTEX-13O1R-2526-SM-5N9FW 7.9
GTEX-NPJ8-2226-SM-3TW8D 6.9
GTEX-13OW6-1826-SM-5N9F9 6.1
GTEX-T5JC-1526-SM-4DM68 5.5
GTEX-ZYFD-1526-SM-5NQ7T 2.7
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

14.5

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 14.5
FF:10017-101C8 60,62,63 years, female 14.5

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