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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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PAFAH1B3
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.1TPM
GTEx:11.9RPKM
FANTOM5:9.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA035639

 

Glandular cells

Not detected  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

18.1

overview Male, age 62
Sample 1
TPM: 8.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 16.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 22.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 27.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 14.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 23.0
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 13.5
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 29.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 8.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

11.9

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 11.9
Samples: 106

Max RPKM: 28.4
Min RPKM: 2
Std RPKM: 5.2
Median RPKM: 11.3
GTEX-13FXS-2826-SM-5LZYC 28.4
GTEX-V1D1-1926-SM-4JBGX 27.8
GTEX-ZUA1-2826-SM-59HLE 24.6
GTEX-145LV-1226-SM-5S2QH 23.1
GTEX-S33H-1826-SM-4AD65 22.6
GTEX-WZTO-0926-SM-4PQZ3 21.7
GTEX-QMRM-1426-SM-4R1K8 21.1
GTEX-SNMC-0926-SM-4DM5U 18.9
GTEX-132NY-2826-SM-5P9G2 18.8
GTEX-11TT1-2026-SM-5EQM8 18.7
GTEX-144GM-0826-SM-5O98R 18.7
GTEX-Q2AI-1126-SM-48U19 18.7
GTEX-RWSA-2026-SM-47JX8 18.7
GTEX-ZY6K-1526-SM-5GZXE 18.3
GTEX-146FQ-1726-SM-5QGPX 18.2
GTEX-XQ3S-2526-SM-4BOOG 17.2
GTEX-111CU-1526-SM-5N9FS 17.0
GTEX-NFK9-2226-SM-3MJGP 16.9
GTEX-WFG8-1826-SM-4LVM4 16.7
GTEX-S4Q7-1026-SM-4AD75 16.2
GTEX-11DYG-2526-SM-5N9BB 16.1
GTEX-OIZH-2026-SM-3NB1M 16.1
GTEX-ZPU1-2026-SM-57WFI 16.0
GTEX-SJXC-2026-SM-4DM6N 14.8
GTEX-XPVG-2026-SM-4B65E 14.3
GTEX-111FC-2026-SM-5GZYO 14.1
GTEX-1399R-0526-SM-5IJEF 14.1
GTEX-1399T-1226-SM-5P9J5 14.1
GTEX-13FTW-1226-SM-5LZZ1 14.0
GTEX-U4B1-1426-SM-4DXTX 14.0
GTEX-YB5E-1826-SM-5IFI4 14.0
GTEX-11TUW-2126-SM-5GU7B 13.9
GTEX-11WQK-2726-SM-5EQMU 13.9
GTEX-REY6-2126-SM-48FD9 13.7
GTEX-XMK1-1026-SM-4B65H 13.6
GTEX-U8XE-2526-SM-4E3IT 13.3
GTEX-14BMV-2326-SM-5RQJ4 13.2
GTEX-14ABY-0726-SM-5Q5DF 13.0
GTEX-ZTX8-1026-SM-5EGHD 13.0
GTEX-UTHO-2726-SM-4JBH9 12.9
GTEX-YF7O-1926-SM-4W1YQ 12.9
GTEX-11NSD-0826-SM-5986S 12.8
GTEX-S95S-1026-SM-4B64M 12.8
GTEX-XOTO-2826-SM-4B65I 12.7
GTEX-13O61-1726-SM-5KM46 12.6
GTEX-139T6-1526-SM-5P9G6 12.5
GTEX-ZVP2-0826-SM-59HJ6 12.5
GTEX-X5EB-1826-SM-4E3K8 11.8
GTEX-145LT-0626-SM-5O99E 11.7
GTEX-QV44-1526-SM-4R1KI 11.4
GTEX-SNOS-1026-SM-4DM4Y 11.4
GTEX-ZLFU-1726-SM-4WWBU 11.3
GTEX-ZZ64-0926-SM-5E44L 11.3
GTEX-11O72-2726-SM-5HL6K 11.2
GTEX-13N2G-1826-SM-5KM1I 11.2
GTEX-U412-2026-SM-4DXSI 11.2
GTEX-117YW-1426-SM-5EGGO 11.1
GTEX-V955-1826-SM-4JBIL 11.1
GTEX-U3ZM-0926-SM-4DXSW 10.9
GTEX-WFON-1626-SM-4LVMV 10.9
GTEX-ZTTD-2726-SM-57WFA 10.8
GTEX-11OF3-1726-SM-5GU5Q 10.7
GTEX-QEG4-2226-SM-4R1JM 10.7
GTEX-Y8E4-2126-SM-5RQHO 10.7
GTEX-11ZUS-2126-SM-5N9E6 10.3
GTEX-XAJ8-0626-SM-47JY4 10.2
GTEX-WFG7-1826-SM-3GIL1 10.0
GTEX-WH7G-1726-SM-4LVKY 10.0
GTEX-12ZZZ-2026-SM-5LZWJ 9.9
GTEX-QV31-1026-SM-4R1K3 9.8
GTEX-QLQ7-1326-SM-4R1JY 9.7
GTEX-13FHO-2826-SM-5K7ZA 9.4
GTEX-T8EM-1826-SM-4DM7F 9.4
GTEX-VJYA-1226-SM-3GIJ6 9.2
GTEX-ZDYS-1226-SM-5IJF3 9.2
GTEX-12C56-1326-SM-5FQSV 9.1
GTEX-132QS-1126-SM-5P9GC 8.9
GTEX-13OW8-0426-SM-5J2NR 8.9
GTEX-13G51-2326-SM-5LZXV 8.6
GTEX-S3XE-1326-SM-4AD4H 8.2
GTEX-PLZ6-1126-SM-3P5ZR 8.0
GTEX-XGQ4-1826-SM-4AT6F 7.9
GTEX-ZT9W-1626-SM-4YCDQ 7.7
GTEX-12BJ1-1226-SM-5LUAE 7.2
GTEX-11P7K-0626-SM-5985Z 6.8
GTEX-RM2N-1126-SM-48FCY 6.8
GTEX-YJ8A-1126-SM-5IFJU 6.8
GTEX-117YX-1526-SM-5H12T 6.6
GTEX-111YS-1726-SM-5GIED 6.5
GTEX-13O21-1126-SM-5N9EV 6.5
GTEX-OOBJ-2026-SM-3NB1R 6.5
GTEX-11EQ9-1726-SM-5HL6U 6.2
GTEX-NPJ8-2426-SM-3MJHL 6.0
GTEX-13NYS-1026-SM-5KLZT 5.7
GTEX-OOBK-2025-SM-3LK5S 5.4
GTEX-WK11-2626-SM-4OOSK 5.4
GTEX-WOFM-0326-SM-4OOSL 5.4
GTEX-11P82-1126-SM-5BC5K 5.3
GTEX-Y9LG-1826-SM-4VBQC 5.2
GTEX-131XF-1926-SM-5DUW4 4.6
GTEX-14E6E-1126-SM-5S2R4 4.2
GTEX-13RTJ-2126-SM-5S2PZ 4.1
GTEX-12696-2226-SM-5EQ65 3.6
GTEX-13111-1326-SM-5GCNO 3.6
GTEX-148VJ-1826-SM-5Q5DV 3.3
GTEX-14C5O-2826-SM-5RQI6 2.0
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

9.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 9.4
FF:10022-101D4 73,79,93 years, male 9.4

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