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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:86.6TPM
GTEx:53.4RPKM
FANTOM5:197.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA054246

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

86.6

overview Male, age 65
Sample 1
TPM: 72.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 101.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 91.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 81.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

53.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 53.4
Samples: 88

Max RPKM: 101.9
Min RPKM: 16.7
Std RPKM: 19.7
Median RPKM: 52.1
GTEX-111YS-1426-SM-5GID8 101.9
GTEX-14DAR-1426-SM-5RQIR 98.3
GTEX-YF7O-1826-SM-5IFIU 90.7
GTEX-ZTSS-0926-SM-59865 90.4
GTEX-ZTX8-0526-SM-59HLD 88.8
GTEX-1122O-1326-SM-5H11F 84.4
GTEX-Y9LG-1626-SM-5IFHM 84.4
GTEX-YB5E-1526-SM-5IFIE 81.3
GTEX-XBED-1426-SM-4AT4G 80.7
GTEX-ZVZP-1826-SM-5GZXB 80.6
GTEX-YEC4-1726-SM-4W21E 77.8
GTEX-11I78-1126-SM-5A5K5 74.6
GTEX-11DXX-1626-SM-5H11H 74.3
GTEX-ZLV1-1126-SM-4WWBW 73.3
GTEX-1399S-2026-SM-5KM4B 73.1
GTEX-13PL7-2626-SM-5IFH4 72.5
GTEX-ZYFG-2026-SM-5E43Y 71.1
GTEX-XUZC-1426-SM-4BRV3 70.7
GTEX-ZA64-1226-SM-5HL7B 69.8
GTEX-ZZ64-0526-SM-5GZXM 69.5
GTEX-14E6E-1626-SM-5RQI7 68.4
GTEX-13D11-0726-SM-5LZZB 67.2
GTEX-ZXES-1526-SM-5NQ95 66.8
GTEX-ZPCL-1726-SM-57WEO 66.4
GTEX-13CF3-1226-SM-5LZXN 66.3
GTEX-11P7K-1626-SM-5GU63 66.0
GTEX-X5EB-1626-SM-4E3IV 65.8
GTEX-13113-1226-SM-5EGHT 65.0
GTEX-11EQ9-1326-SM-5985X 62.6
GTEX-145LT-1026-SM-5LU9O 61.5
GTEX-ZLFU-1526-SM-4WWBT 61.4
GTEX-ZVP2-1726-SM-5GU5P 60.7
GTEX-13FTW-2026-SM-5IJE2 60.3
GTEX-131XF-1326-SM-5GCMQ 59.5
GTEX-139T6-1026-SM-5IJGC 58.6
GTEX-WQUQ-2426-SM-4MVNW 58.3
GTEX-WH7G-1626-SM-4LVMY 56.9
GTEX-Y114-1426-SM-4TT6W 56.9
GTEX-13FH7-1226-SM-5IJFK 56.8
GTEX-133LE-1426-SM-5IFH1 56.1
GTEX-11DXZ-1326-SM-5H11X 55.1
GTEX-ZYWO-1526-SM-5SIAL 54.3
GTEX-11XUK-1426-SM-5EQMG 53.2
GTEX-WFJO-0926-SM-4LVM2 52.1
GTEX-ZVT2-2126-SM-5NQ93 52.0
GTEX-WFG7-1726-SM-4LVME 50.7
GTEX-WRHK-1026-SM-4MVOD 50.6
GTEX-12BJ1-1926-SM-5HL9Z 50.0
GTEX-1399U-2126-SM-5IFEZ 48.8
GTEX-13RTK-0826-SM-5Q5C6 48.7
GTEX-XAJ8-0526-SM-47JYK 47.8
GTEX-XGQ4-1326-SM-4GIDU 47.3
GTEX-13O61-1326-SM-5KM31 46.8
GTEX-11NSD-1726-SM-5N9C3 46.7
GTEX-XXEK-1026-SM-4BRUW 46.2
GTEX-11VI4-1626-SM-5EQKO 45.7
GTEX-Z9EW-0926-SM-5CVMM 44.5
GTEX-ZTPG-2626-SM-57WFX 43.8
GTEX-131XG-1726-SM-5LZUR 43.0
GTEX-11P82-0826-SM-5P9GU 42.7
GTEX-ZEX8-1826-SM-57WBH 42.4
GTEX-Y5LM-1626-SM-4VDTB 42.0
GTEX-13QBU-1926-SM-5IJEW 39.8
GTEX-WFG8-1626-SM-4LVMB 39.3
GTEX-UPK5-2026-SM-4JBIM 39.3
GTEX-139YR-2226-SM-5IFFW 38.7
GTEX-VUSG-1726-SM-4KKZL 38.6
GTEX-1399R-2026-SM-5K7WN 38.3
GTEX-ZP4G-1626-SM-57WGD 38.0
GTEX-13O21-1026-SM-5IJDU 37.7
GTEX-145ME-0926-SM-5O9AR 36.0
GTEX-X15G-1426-SM-4PQZK 34.8
GTEX-ZC5H-2326-SM-4WAYT 34.5
GTEX-148VJ-2226-SM-5NQ9M 34.4
GTEX-ZPIC-2326-SM-57WDW 33.5
GTEX-ZQG8-2526-SM-57WEQ 32.6
GTEX-VJYA-0926-SM-4KL1N 32.5
GTEX-13OVI-1926-SM-5IJCG 29.1
GTEX-13111-1426-SM-5DUW3 27.7
GTEX-WEY5-1526-SM-4LMJF 25.1
GTEX-12WSK-1526-SM-5CVNO 23.7
GTEX-Y3IK-1726-SM-4YCCR 23.2
GTEX-ZQUD-0926-SM-57WE3 21.9
GTEX-111CU-1326-SM-5NQ8L 21.1
GTEX-117YX-0326-SM-5GICL 19.7
GTEX-1192X-2526-SM-59868 18.7
GTEX-XMK1-1826-SM-4B66F 18.6
GTEX-ZF2S-1726-SM-57WFT 16.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

197.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 197.3
FF:10024-101D6 15,40,85 years, mixed 197.3

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The Human Protein Atlas project is funded
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