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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.5TPM
GTEx:12.0RPKM
FANTOM5:57.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA054105

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

24.5

overview Male, age 65
Sample 1
TPM: 20.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 24.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 26.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 27.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

12.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 12.0
Samples: 88

Max RPKM: 23.4
Min RPKM: 7.9
Std RPKM: 3
Median RPKM: 11
GTEX-ZF2S-1726-SM-57WFT 23.4
GTEX-117YX-0326-SM-5GICL 19.1
GTEX-ZC5H-2326-SM-4WAYT 18.9
GTEX-1192X-2526-SM-59868 18.9
GTEX-XMK1-1826-SM-4B66F 18.8
GTEX-111CU-1326-SM-5NQ8L 18.7
GTEX-13111-1426-SM-5DUW3 17.1
GTEX-12WSK-1526-SM-5CVNO 17.0
GTEX-13OVI-1926-SM-5IJCG 16.4
GTEX-148VJ-2226-SM-5NQ9M 16.4
GTEX-ZQUD-0926-SM-57WE3 16.0
GTEX-UPK5-2026-SM-4JBIM 15.6
GTEX-WEY5-1526-SM-4LMJF 15.6
GTEX-VUSG-1726-SM-4KKZL 15.1
GTEX-WFG7-1726-SM-4LVME 14.8
GTEX-XAJ8-0526-SM-47JYK 14.4
GTEX-WFJO-0926-SM-4LVM2 14.4
GTEX-X15G-1426-SM-4PQZK 14.2
GTEX-ZTPG-2626-SM-57WFX 14.0
GTEX-11NSD-1726-SM-5N9C3 14.0
GTEX-145ME-0926-SM-5O9AR 13.8
GTEX-131XG-1726-SM-5LZUR 13.6
GTEX-WH7G-1626-SM-4LVMY 13.6
GTEX-WFG8-1626-SM-4LVMB 13.2
GTEX-ZQG8-2526-SM-57WEQ 13.2
GTEX-ZLFU-1526-SM-4WWBT 13.1
GTEX-13QBU-1926-SM-5IJEW 13.0
GTEX-13O61-1326-SM-5KM31 13.0
GTEX-11XUK-1426-SM-5EQMG 13.0
GTEX-WRHK-1026-SM-4MVOD 12.9
GTEX-Y5LM-1626-SM-4VDTB 12.7
GTEX-13O21-1026-SM-5IJDU 12.6
GTEX-Z9EW-0926-SM-5CVMM 12.5
GTEX-WQUQ-2426-SM-4MVNW 12.4
GTEX-ZP4G-1626-SM-57WGD 12.1
GTEX-Y3IK-1726-SM-4YCCR 11.9
GTEX-ZVT2-2126-SM-5NQ93 11.8
GTEX-14E6E-1626-SM-5RQI7 11.8
GTEX-XBED-1426-SM-4AT4G 11.7
GTEX-13RTK-0826-SM-5Q5C6 11.6
GTEX-ZPIC-2326-SM-57WDW 11.6
GTEX-ZTSS-0926-SM-59865 11.4
GTEX-133LE-1426-SM-5IFH1 11.3
GTEX-ZEX8-1826-SM-57WBH 11.0
GTEX-12BJ1-1926-SM-5HL9Z 10.9
GTEX-ZLV1-1126-SM-4WWBW 10.8
GTEX-11P7K-1626-SM-5GU63 10.7
GTEX-13FH7-1226-SM-5IJFK 10.7
GTEX-11I78-1126-SM-5A5K5 10.6
GTEX-XXEK-1026-SM-4BRUW 10.5
GTEX-1399S-2026-SM-5KM4B 10.4
GTEX-1399U-2126-SM-5IFEZ 10.4
GTEX-11P82-0826-SM-5P9GU 10.4
GTEX-13PL7-2626-SM-5IFH4 10.3
GTEX-Y114-1426-SM-4TT6W 10.1
GTEX-11VI4-1626-SM-5EQKO 10.1
GTEX-ZVP2-1726-SM-5GU5P 10.0
GTEX-11DXX-1626-SM-5H11H 10.0
GTEX-1399R-2026-SM-5K7WN 10.0
GTEX-13113-1226-SM-5EGHT 9.9
GTEX-ZPCL-1726-SM-57WEO 9.8
GTEX-139T6-1026-SM-5IJGC 9.8
GTEX-131XF-1326-SM-5GCMQ 9.8
GTEX-ZTX8-0526-SM-59HLD 9.7
GTEX-ZZ64-0526-SM-5GZXM 9.7
GTEX-1122O-1326-SM-5H11F 9.7
GTEX-YF7O-1826-SM-5IFIU 9.6
GTEX-13CF3-1226-SM-5LZXN 9.6
GTEX-XUZC-1426-SM-4BRV3 9.5
GTEX-ZA64-1226-SM-5HL7B 9.4
GTEX-ZYWO-1526-SM-5SIAL 9.4
GTEX-ZVZP-1826-SM-5GZXB 9.4
GTEX-139YR-2226-SM-5IFFW 9.4
GTEX-YEC4-1726-SM-4W21E 9.3
GTEX-11DXZ-1326-SM-5H11X 9.3
GTEX-11EQ9-1326-SM-5985X 9.3
GTEX-13FTW-2026-SM-5IJE2 9.3
GTEX-XGQ4-1326-SM-4GIDU 9.3
GTEX-14DAR-1426-SM-5RQIR 9.0
GTEX-Y9LG-1626-SM-5IFHM 9.0
GTEX-ZXES-1526-SM-5NQ95 8.9
GTEX-13D11-0726-SM-5LZZB 8.8
GTEX-145LT-1026-SM-5LU9O 8.7
GTEX-ZYFG-2026-SM-5E43Y 8.6
GTEX-X5EB-1626-SM-4E3IV 8.5
GTEX-VJYA-0926-SM-4KL1N 8.1
GTEX-YB5E-1526-SM-5IFIE 8.1
GTEX-111YS-1426-SM-5GID8 7.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

57.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 57.0
FF:10024-101D6 15,40,85 years, mixed 57.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.