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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:38.3TPM
GTEx:7.2RPKM
FANTOM5:72.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not detected
Adipocytes:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA000440

  

Antibody CAB000052

  

Antibody CAB002800

  

Antibody CAB056154

  

Antibody CAB068221

  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected   Medium  

Adipocytes

 Not detected   Not detected  

Peripheral nerve

 Not detected  
            
         
         
         

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA000440

  

Antibody CAB000052

  

Antibody CAB002800

  

Antibody CAB056154

  

Antibody CAB068221

  

Adipocytes

 Not detected   Not detected   Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected   Not detected  
         
         
         

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

38.3
N/A Female, age 80
Sample 1
TPM: 6.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 7.2
N/A Female, age 57
Sample 3
TPM: 7.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 73.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 96.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

7.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 5.5
Samples: 350

Max RPKM: 21.7
Min RPKM: 0.6
Std RPKM: 3.3
Median RPKM: 4.5
GTEX-111VG-2326-SM-5N9BK 21.7
GTEX-13NZA-0126-SM-5K7UH 16.8
GTEX-ZVZO-0226-SM-5A5LA 16.7
GTEX-11GSO-2326-SM-5A5LX 16.5
GTEX-13JVG-0226-SM-5J1MW 16.4
GTEX-139TU-0226-SM-5J1NM 16.3
GTEX-13FTY-0626-SM-5L3F8 15.7
GTEX-11PRG-0626-SM-5BC56 15.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 9.8
Samples: 227

Max RPKM: 65.6
Min RPKM: 1.7
Std RPKM: 7
Median RPKM: 8.1
GTEX-ZVZP-1126-SM-5GICU 65.6
GTEX-ZDYS-2226-SM-5S2MI 39.9
GTEX-Y9LG-1226-SM-4VBQA 39.4
GTEX-ZE7O-1526-SM-5J1NH 30.4
GTEX-ZV7C-0826-SM-59HK8 29.8
GTEX-WFJO-1026-SM-3GIKL 25.1
GTEX-11EM3-1126-SM-5A5KM 24.8
GTEX-14A6H-1026-SM-5SIAZ 23.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

72.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 72.5
FF:10010-101C1 65,65,76 years, mixed 72.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.