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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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SLC27A5
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA007292   AMAb90572   AMAb90575  

Host species

Rabbit   Mouse   Mouse  

Clonality

pAb   mAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G   Protein A/G  

Other gene match

     

Released in version

4   10   13  

References

2      

VALIDATION SUMMARY

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 
Immunohistochemistry

Supported   Supported   Supported  
Western blot

Supported   Supported   Supported  
Protein array

Approved      

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunohistochemical staining of human liver shows strong cytoplasmic positivity in hepatocytes.   Immunohistochemical staining of human liver shows strong cytoplasmic positivity in hepatocytes.   Immunohistochemical staining of human liver shows moderate cytoplasmic positivity in hepatocytes.  

Expression

RNA: detected in 37 tissues
Protein: detected in 6 cell types
  RNA: detected in 37 tissues
Protein: detected in 1 cell types
  RNA: detected in 37 tissues
Protein: detected in 1 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:150   1:1000   1:1200  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
 

     

Figure description

Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 100, 70, 55, 35, 25, 15, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 100, 70, 55, 35, 25, 15, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

75.4, 66.8   75.4, 66.8, 10.9   75.4, 66.8, 10.9  

Antibody dilution

1:250   1:1000   1:1000  

PROTEIN ARRAY

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
     

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.      

Antibody dilution

1:500      

ANTIGEN INFORMATION

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 

Antigen

Recombinant protein fragment   Recombinant protein   Recombinant protein  

Length (aa)

123      

Antigen sequence

RVLVVDPDLRESLEEILPKLQAENIRCFYLSHTSPTPGVGALGAALDAAP
SHPVPADLRAGITWRSPALFIYTSGTTGLPKPAILTHERVLQMSKMLSLS
GATADDVVYTVLPLYHVMGLVVG
     

Matching transcripts

SLC27A5-001 - ENSP00000263093 [100%]
SLC27A5-002 - ENSP00000470368 [94%]
     

Other gene match

     
ANTIGEN VIEW
SLC27A5-001
SLC27A5-002

RELEVANT PUBLICATIONS

 
 

Antibody HPA007292

 

Antibody CAB056160

 

Antibody CAB068239

 

1.

Diagnosis in bile acid-CoA: amino acid N-acyltransferase deficiency
Hadžić N et al
World J Gastroenterol 2012;18(25):3322-6
     

2.

Genetic defects in bile acid conjugation cause fat-soluble vitamin deficiency
Setchell KD et al
Gastroenterology 2013;144(5):945-955.e6; quiz e14-5
Application: IHC
     
 

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