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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:6.2TPM
GTEx:7.7RPKM
FANTOM5:41.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA007625

 

Glandular cells

Medium  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

6.2

overview Male, age 65
Sample 1
TPM: 5.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 6.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 7.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 4.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 7.7
Samples: 88

Max RPKM: 12.2
Min RPKM: 3.8
Std RPKM: 1.9
Median RPKM: 7.6
GTEX-11VI4-1626-SM-5EQKO 12.2
GTEX-WFJO-0926-SM-4LVM2 11.6
GTEX-11XUK-1426-SM-5EQMG 11.6
GTEX-WH7G-1626-SM-4LVMY 11.4
GTEX-VUSG-1726-SM-4KKZL 11.4
GTEX-131XG-1726-SM-5LZUR 11.4
GTEX-13O61-1326-SM-5KM31 11.3
GTEX-11NSD-1726-SM-5N9C3 10.8
GTEX-1399U-2126-SM-5IFEZ 10.7
GTEX-UPK5-2026-SM-4JBIM 10.5
GTEX-12BJ1-1926-SM-5HL9Z 10.4
GTEX-ZLFU-1526-SM-4WWBT 10.3
GTEX-ZC5H-2326-SM-4WAYT 10.3
GTEX-X15G-1426-SM-4PQZK 10.1
GTEX-13QBU-1926-SM-5IJEW 10.0
GTEX-ZP4G-1626-SM-57WGD 9.7
GTEX-13FH7-1226-SM-5IJFK 9.7
GTEX-Z9EW-0926-SM-5CVMM 9.5
GTEX-11P82-0826-SM-5P9GU 9.3
GTEX-145ME-0926-SM-5O9AR 9.2
GTEX-148VJ-2226-SM-5NQ9M 9.1
GTEX-1192X-2526-SM-59868 9.0
GTEX-ZEX8-1826-SM-57WBH 8.8
GTEX-11P7K-1626-SM-5GU63 8.7
GTEX-ZVP2-1726-SM-5GU5P 8.7
GTEX-1399S-2026-SM-5KM4B 8.6
GTEX-14E6E-1626-SM-5RQI7 8.4
GTEX-XAJ8-0526-SM-47JYK 8.4
GTEX-WEY5-1526-SM-4LMJF 8.3
GTEX-ZF2S-1726-SM-57WFT 8.2
GTEX-13RTK-0826-SM-5Q5C6 8.2
GTEX-WRHK-1026-SM-4MVOD 8.1
GTEX-13O21-1026-SM-5IJDU 8.1
GTEX-Y5LM-1626-SM-4VDTB 8.0
GTEX-XMK1-1826-SM-4B66F 8.0
GTEX-ZQG8-2526-SM-57WEQ 8.0
GTEX-12WSK-1526-SM-5CVNO 7.9
GTEX-WFG8-1626-SM-4LVMB 7.8
GTEX-1399R-2026-SM-5K7WN 7.8
GTEX-Y114-1426-SM-4TT6W 7.7
GTEX-13113-1226-SM-5EGHT 7.7
GTEX-ZTPG-2626-SM-57WFX 7.7
GTEX-13111-1426-SM-5DUW3 7.7
GTEX-117YX-0326-SM-5GICL 7.7
GTEX-ZYWO-1526-SM-5SIAL 7.6
GTEX-131XF-1326-SM-5GCMQ 7.6
GTEX-11I78-1126-SM-5A5K5 7.5
GTEX-ZXES-1526-SM-5NQ95 7.4
GTEX-ZZ64-0526-SM-5GZXM 7.4
GTEX-139YR-2226-SM-5IFFW 7.4
GTEX-11EQ9-1326-SM-5985X 7.3
GTEX-13OVI-1926-SM-5IJCG 7.3
GTEX-11DXZ-1326-SM-5H11X 7.2
GTEX-11DXX-1626-SM-5H11H 7.1
GTEX-XGQ4-1326-SM-4GIDU 7.0
GTEX-133LE-1426-SM-5IFH1 7.0
GTEX-ZVT2-2126-SM-5NQ93 6.9
GTEX-Y3IK-1726-SM-4YCCR 6.9
GTEX-WFG7-1726-SM-4LVME 6.6
GTEX-111CU-1326-SM-5NQ8L 6.6
GTEX-XUZC-1426-SM-4BRV3 6.6
GTEX-139T6-1026-SM-5IJGC 6.5
GTEX-ZPIC-2326-SM-57WDW 6.3
GTEX-VJYA-0926-SM-4KL1N 6.2
GTEX-13CF3-1226-SM-5LZXN 6.2
GTEX-ZTX8-0526-SM-59HLD 6.1
GTEX-WQUQ-2426-SM-4MVNW 6.0
GTEX-145LT-1026-SM-5LU9O 6.0
GTEX-ZTSS-0926-SM-59865 5.9
GTEX-XBED-1426-SM-4AT4G 5.9
GTEX-XXEK-1026-SM-4BRUW 5.7
GTEX-YF7O-1826-SM-5IFIU 5.7
GTEX-ZQUD-0926-SM-57WE3 5.6
GTEX-ZPCL-1726-SM-57WEO 5.5
GTEX-X5EB-1626-SM-4E3IV 5.5
GTEX-ZYFG-2026-SM-5E43Y 5.4
GTEX-YB5E-1526-SM-5IFIE 5.4
GTEX-ZLV1-1126-SM-4WWBW 5.3
GTEX-13PL7-2626-SM-5IFH4 5.3
GTEX-ZA64-1226-SM-5HL7B 5.3
GTEX-1122O-1326-SM-5H11F 5.2
GTEX-14DAR-1426-SM-5RQIR 5.1
GTEX-Y9LG-1626-SM-5IFHM 5.0
GTEX-13D11-0726-SM-5LZZB 4.9
GTEX-13FTW-2026-SM-5IJE2 4.8
GTEX-ZVZP-1826-SM-5GZXB 4.7
GTEX-YEC4-1726-SM-4W21E 4.3
GTEX-111YS-1426-SM-5GID8 3.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

41.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 41.4
FF:10024-101D6 15,40,85 years, mixed 41.4

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by the Knut & Alice Wallenberg foundation.