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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:65.8TPM
GTEx:59.3RPKM
FANTOM5:68.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA057242

  

Antibody CAB011235

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Medium  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA057242

  

Antibody CAB011235

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Not detected   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

65.8
N/A Female, age 80
Sample 1
TPM: 86.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 54.5
N/A Female, age 57
Sample 3
TPM: 52.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 70.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 66.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

59.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 63.4
Samples: 350

Max RPKM: 103.5
Min RPKM: 34.3
Std RPKM: 11.1
Median RPKM: 62.9
GTEX-SN8G-0226-SM-4DM6B 103.5
GTEX-12WSA-0326-SM-5BC6I 95.4
GTEX-13OVI-1326-SM-5IJBO 93.7
GTEX-XBEC-0326-SM-4AT4M 90.4
GTEX-ZYY3-0226-SM-5E45M 89.4
GTEX-12WSD-0226-SM-59HKO 88.7
GTEX-13PLJ-0126-SM-5L3HU 88.0
GTEX-X5EB-2426-SM-4E3HX 87.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 52.9
Samples: 227

Max RPKM: 104.6
Min RPKM: 30.4
Std RPKM: 10.4
Median RPKM: 51.6
GTEX-13O3P-0926-SM-5IFFI 104.6
GTEX-13NZ9-2026-SM-5KM1U 88.9
GTEX-11DXY-0326-SM-5H12F 86.4
GTEX-12WSA-1626-SM-5EGJV 74.3
GTEX-YECK-1426-SM-5IFHE 73.6
GTEX-13IVO-2426-SM-5K7V9 73.2
GTEX-ZYW4-2226-SM-5GZYG 72.5
GTEX-12WSC-1726-SM-5GCN3 71.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

68.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 68.2
FF:10010-101C1 65,65,76 years, mixed 68.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.