We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CTTN
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:75.3TPM
GTEx:70.5RPKM
FANTOM5:93.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA057242

 

Antibody CAB011235

 

Squamous epithelial cells

Medium   High  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

75.3

overview Female, age 70
Sample 1
TPM: 66.3
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 76.5
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 83.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

70.5

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 70.5
Samples: 286

Max RPKM: 111.1
Min RPKM: 44.6
Std RPKM: 9.8
Median RPKM: 69.1
GTEX-ZZPT-1426-SM-5N9C5 111.1
GTEX-13O1R-1326-SM-5IJF5 99.3
GTEX-WK11-1026-SM-4OOS8 98.6
GTEX-X585-1226-SM-46MW7 98.6
GTEX-144FL-2726-SM-5O98Z 97.1
GTEX-12ZZW-1726-SM-5DUVD 96.4
GTEX-1497J-2726-SM-5SI9W 93.0
GTEX-YECK-1626-SM-5IFHQ 91.5
GTEX-132Q8-1826-SM-5EGIY 90.2
GTEX-WOFM-0626-SM-4OOS3 89.7
GTEX-NPJ8-1926-SM-3MJGB 89.6
GTEX-14C38-2126-SM-5RQJO 88.6
GTEX-PSDG-1326-SM-48TD2 87.8
GTEX-ZVE2-1326-SM-5NQ94 87.8
GTEX-148VJ-1026-SM-5LU98 87.6
GTEX-XLM4-2326-SM-4TT2D 87.5
GTEX-13X6H-1326-SM-5LU42 87.4
GTEX-PLZ4-1626-SM-3P618 87.3
GTEX-R3RS-1326-SM-48FE7 87.0
GTEX-S33H-0826-SM-4AD5Y 86.1
GTEX-YJ89-1526-SM-5P9IR 86.1
GTEX-ZXES-1126-SM-5GZXN 86.1
GTEX-139UW-1126-SM-5IJEJ 85.7
GTEX-R45C-1226-SM-48FEE 85.4
GTEX-12WSA-1426-SM-5EGJU 85.3
GTEX-13PVQ-1726-SM-5IFF3 84.8
GTEX-11NUK-1326-SM-5P9GN 84.7
GTEX-11DYG-1326-SM-5N9DO 84.4
GTEX-N7MT-0326-SM-48TDP 83.9
GTEX-ZAB4-1126-SM-5HL86 83.7
GTEX-139TU-1226-SM-5J2NL 83.6
GTEX-UJHI-0826-SM-4IHLM 83.6
GTEX-RN64-1026-SM-48FDX 83.5
GTEX-13W46-1926-SM-5J2MF 83.2
GTEX-QEG5-1426-SM-447AS 83.1
GTEX-11DZ1-2026-SM-5A5KG 83.0
GTEX-145LV-1326-SM-5S2QI 83.0
GTEX-1399Q-1126-SM-5P9JA 82.8
GTEX-QVUS-0626-SM-447CC 81.7
GTEX-QEG4-0726-SM-4R1JL 81.6
GTEX-ZYFG-1126-SM-5GICY 81.5
GTEX-1212Z-2126-SM-5FQTM 81.3
GTEX-X62O-2226-SM-46MW3 81.3
GTEX-ZF3C-1626-SM-4WWB4 81.3
GTEX-ZYY3-1526-SM-5SIA9 81.2
GTEX-ZYT6-1126-SM-5GZYR 81.1
GTEX-13OVI-2626-SM-5KM4T 80.9
GTEX-14BIN-2726-SM-5RQIE 80.8
GTEX-11ZU8-1526-SM-5EGHX 80.0
GTEX-13X6I-1026-SM-5LU4C 79.8
GTEX-ZYW4-1326-SM-5E45N 79.8
GTEX-145MN-1026-SM-5NQ9G 79.7
GTEX-14A6H-1326-SM-5NQBC 79.4
GTEX-TSE9-1226-SM-4DXTM 79.4
GTEX-11ZTS-2626-SM-5EGIC 79.2
GTEX-144GM-1426-SM-5LU31 79.1
GTEX-11TUW-1326-SM-5EQKV 78.3
GTEX-131XF-0826-SM-5GICG 78.1
GTEX-13G51-0926-SM-5IFFU 78.1
GTEX-WQUQ-1626-SM-4OOSH 78.0
GTEX-P78B-1026-SM-3NMC4 77.7
GTEX-U8XE-1726-SM-4E3IF 77.7
GTEX-13OW8-2326-SM-5L3I9 77.5
GTEX-Y5LM-1026-SM-4VDSQ 77.5
GTEX-13111-0826-SM-5LZV3 77.4
GTEX-OXRL-0626-SM-3NM9C 77.3
GTEX-YF7O-0926-SM-5IFIF 77.2
GTEX-UPK5-1226-SM-4IHL8 76.8
GTEX-ZPCL-1426-SM-57WEC 76.7
GTEX-145LS-1826-SM-5LUAZ 76.6
GTEX-ZYVF-2226-SM-5GIDD 76.6
GTEX-13OVJ-1226-SM-5L3HA 76.5
GTEX-ZE9C-1126-SM-4WWBD 76.5
GTEX-TMMY-1126-SM-4DXSX 76.4
GTEX-Y5V5-1626-SM-4VDSG 76.1
GTEX-R55E-1326-SM-48FCR 75.8
GTEX-P4PP-0626-SM-3NM9X 75.7
GTEX-PLZ5-0926-SM-3TW8L 75.7
GTEX-Y111-1626-SM-57WCY 75.1
GTEX-ZUA1-1226-SM-5NQ6O 75.0
GTEX-13NZB-1226-SM-5J2MW 74.9
GTEX-13QBU-1026-SM-5LU3R 74.8
GTEX-13FHO-1726-SM-5IFGM 74.6
GTEX-X4LF-0626-SM-4QASB 74.3
GTEX-SUCS-0726-SM-4DM7J 73.9
GTEX-RVPV-0526-SM-47JYL 73.8
GTEX-R55D-1126-SM-48FEB 73.7
GTEX-REY6-1326-SM-48FDO 73.7
GTEX-NFK9-1126-SM-3LK78 73.6
GTEX-U3ZN-1726-SM-4DXUQ 73.6
GTEX-144GO-2726-SM-5O9A2 73.5
GTEX-11LCK-1726-SM-5S2OQ 73.4
GTEX-145ME-0526-SM-5QGQV 73.4
GTEX-UJMC-0926-SM-4IHLK 73.4
GTEX-OOBK-0625-SM-3LK5P 73.2
GTEX-12WSL-1526-SM-5GCP8 73.1
GTEX-QLQW-0526-SM-4R1KS 73.1
GTEX-QEL4-1426-SM-447AC 73.0
GTEX-XK95-1026-SM-4GIDV 73.0
GTEX-13FTW-1626-SM-5KM4N 72.9
GTEX-XUJ4-1026-SM-4BOPB 72.8
GTEX-QDVN-1026-SM-48TZA 72.7
GTEX-11GSP-1826-SM-5N9DQ 72.6
GTEX-S32W-0926-SM-4AD5X 72.5
GTEX-XBED-1026-SM-48TCB 72.5
GTEX-V955-1126-SM-4JBH3 72.4
GTEX-ZTX8-0226-SM-5E44D 72.3
GTEX-11VI4-0526-SM-5EQ48 72.1
GTEX-ZA64-0626-SM-5HL9O 72.1
GTEX-14ICL-0526-SM-5RQJ6 72.0
GTEX-QESD-0826-SM-47J4G 72.0
GTEX-RU72-0726-SM-46MUW 72.0
GTEX-11NSD-1126-SM-5N9BQ 71.9
GTEX-X3Y1-1326-SM-4PQZB 71.9
GTEX-13U4I-1126-SM-5LU3S 71.7
GTEX-UPIC-1026-SM-4IHLT 71.5
GTEX-O5YV-1026-SM-3LK72 71.4
GTEX-13QJ3-1726-SM-5RQK9 71.0
GTEX-131YS-1426-SM-5IJF7 70.9
GTEX-144GN-0626-SM-5O9B2 70.9
GTEX-XOTO-2126-SM-4B64U 70.9
GTEX-S4Q7-0626-SM-4AD5M 70.8
GTEX-WFG8-1226-SM-4V6EI 70.5
GTEX-X4EO-1226-SM-4QARR 70.3
GTEX-ZGAY-1126-SM-4WWBS 70.3
GTEX-QDVJ-0726-SM-48U1W 70.2
GTEX-XGQ4-1526-SM-4AT6H 70.2
GTEX-T8EM-0526-SM-4DM64 70.1
GTEX-11DXX-1126-SM-5GZZK 69.9
GTEX-145MF-1426-SM-5O9B6 69.9
GTEX-XQ8I-1526-SM-4BOOH 69.9
GTEX-111YS-0926-SM-5EGGI 69.8
GTEX-13W3W-1626-SM-5LU35 69.7
GTEX-SNMC-0526-SM-4DM69 69.7
GTEX-T2IS-0826-SM-4DM6L 69.7
GTEX-WFON-0826-SM-4LVMI 69.7
GTEX-ZZ64-0226-SM-5E44X 69.6
GTEX-12KS4-0926-SM-5BC5S 69.5
GTEX-OXRP-0926-SM-48TC1 69.5
GTEX-ZC5H-1326-SM-5HL7E 69.5
GTEX-11EM3-0826-SM-5N9CC 69.3
GTEX-X15G-0826-SM-4PQZD 69.2
GTEX-13FLV-1126-SM-5J2NO 69.1
GTEX-XBEW-1326-SM-4AT63 69.1
GTEX-111CU-0726-SM-5GZYD 68.9
GTEX-11I78-1526-SM-5A5K7 68.9
GTEX-RUSQ-0826-SM-47JWW 68.9
GTEX-U4B1-0826-SM-4DXTW 68.9
GTEX-1122O-1726-SM-5GICM 68.8
GTEX-P4QT-0626-SM-3NMCP 68.8
GTEX-U3ZH-1026-SM-4DXUZ 68.8
GTEX-1399U-1026-SM-5J1OC 68.4
GTEX-Y8E4-1726-SM-5LU9G 68.4
GTEX-13RTK-0526-SM-5S2QF 68.3
GTEX-13FH7-0526-SM-5IJF8 68.2
GTEX-VUSG-1226-SM-4KKZF 68.2
GTEX-Q2AH-0826-SM-48TZN 68.1
GTEX-12WSK-1126-SM-5LZV8 68.0
GTEX-11EQ9-0726-SM-5A5K2 67.8
GTEX-132QS-1426-SM-5P9GE 67.8
GTEX-145MO-1426-SM-5Q5BS 67.8
GTEX-XQ3S-1126-SM-4BOPK 67.8
GTEX-ZAB5-0926-SM-5CVMV 67.8
GTEX-11EMC-2226-SM-5A5JW 67.7
GTEX-SNOS-0626-SM-4DM5F 67.7
GTEX-WFJO-0826-SM-4LVM5 67.7
GTEX-S4P3-0426-SM-4AD56 67.5
GTEX-146FR-0426-SM-5SI97 67.4
GTEX-Y3I4-1226-SM-4TT8N 67.4
GTEX-14BMU-0926-SM-5S2QB 67.1
GTEX-ZY6K-0626-SM-59HJL 67.1
GTEX-13O21-0626-SM-5IJDI 67.0
GTEX-OIZG-1026-SM-3LK5X 67.0
GTEX-146FQ-1026-SM-5LU8I 66.8
GTEX-ZLV1-0526-SM-4WWD4 66.8
GTEX-T5JC-1726-SM-4DM6U 66.7
GTEX-W5WG-1626-SM-4LMKG 66.6
GTEX-ZVT2-1326-SM-5E45H 66.6
GTEX-Y8LW-0726-SM-5IFI1 66.5
GTEX-13O3Q-0826-SM-5IFGF 66.4
GTEX-1399S-1326-SM-5P9GH 66.3
GTEX-147F3-0826-SM-5NQA7 66.3
GTEX-PLZ6-0526-SM-3P61C 66.3
GTEX-ZVP2-1326-SM-57WCE 66.3
GTEX-11XUK-0826-SM-5GU6P 66.2
GTEX-12696-1326-SM-5FQTJ 66.2
GTEX-WVLH-1426-SM-4MVNX 66.2
GTEX-146FH-1726-SM-5QGQ2 66.1
GTEX-S341-0526-SM-4AD5U 66.1
GTEX-12ZZY-1426-SM-5N9EI 66.0
GTEX-SE5C-1226-SM-4BRWV 66.0
GTEX-VJYA-0726-SM-4KL1T 66.0
GTEX-ZTPG-1626-SM-5DUX2 65.9
GTEX-117YW-1926-SM-5H121 65.8
GTEX-QV44-1126-SM-4R1KO 65.8
GTEX-S7SF-0926-SM-4AD4M 65.8
GTEX-12C56-1226-SM-5FQSU 65.6
GTEX-12WSD-1826-SM-5GCOA 65.4
GTEX-QCQG-0626-SM-48U21 65.2
GTEX-13X6K-2126-SM-5O9D4 65.1
GTEX-OIZI-1426-SM-3NB1T 65.0
GTEX-P4QS-0626-SM-3NMD1 64.9
GTEX-13D11-1926-SM-5IFGB 64.8
GTEX-RU1J-0326-SM-46MUM 64.7
GTEX-XMD2-1326-SM-4YCET 64.7
GTEX-13CF3-1626-SM-5IFG9 64.6
GTEX-ZDYS-0826-SM-4WWCR 64.6
GTEX-13OVG-0626-SM-5IFEP 64.3
GTEX-RNOR-1226-SM-48FDQ 64.3
GTEX-1211K-0926-SM-5FQTL 64.2
GTEX-WH7G-0926-SM-4LVMJ 64.2
GTEX-TKQ1-0326-SM-4DXSM 64.1
GTEX-14H4A-1626-SM-5SI69 64.0
GTEX-X4XY-1726-SM-46MVO 63.9
GTEX-ZTSS-0626-SM-59867 63.9
GTEX-OXRN-1726-SM-3NM9B 63.8
GTEX-WFG7-1126-SM-4LMK3 63.8
GTEX-XMK1-1326-SM-4B65Q 63.8
GTEX-WRHK-0526-SM-4MVOF 63.7
GTEX-Y9LG-0626-SM-4WWDH 63.4
GTEX-11P82-0526-SM-5986P 63.3
GTEX-PWN1-0626-SM-48TDT 63.3
GTEX-13S86-0826-SM-5SI6J 63.2
GTEX-RWS6-0826-SM-47JXF 63.2
GTEX-YB5E-0926-SM-4WWDQ 63.2
GTEX-139T6-0626-SM-5IFF9 63.1
GTEX-XYKS-1526-SM-4BRUP 63.1
GTEX-ZT9X-0526-SM-5GCOP 63.1
GTEX-12BJ1-1626-SM-5HL8Y 63.0
GTEX-XXEK-0326-SM-4BRVV 63.0
GTEX-P4PQ-0626-SM-3NMCU 62.7
GTEX-XV7Q-1126-SM-4BRVS 62.7
GTEX-11P81-0826-SM-5P9GR 62.4
GTEX-R55C-0826-SM-48FCL 62.3
GTEX-U3ZM-0526-SM-4DXTB 62.3
GTEX-ZF29-1326-SM-4WWB6 62.2
GTEX-Y5V6-1026-SM-4VBS2 62.1
GTEX-ZPU1-1426-SM-4WWFU 62.0
GTEX-S95S-0426-SM-4B64I 61.8
GTEX-PVOW-1626-SM-48TC9 61.7
GTEX-Y114-0926-SM-4TT7J 61.7
GTEX-XUZC-0426-SM-4BOPE 61.3
GTEX-PWCY-0726-SM-48TCS 61.1
GTEX-133LE-0626-SM-5IFFJ 61.0
GTEX-T5JW-1326-SM-4DM5G 61.0
GTEX-QLQ7-0926-SM-447BC 60.9
GTEX-14E6E-0726-SM-5S2R3 60.7
GTEX-12ZZX-1326-SM-5DUWI 60.5
GTEX-14DAQ-1426-SM-5RQJD 60.4
GTEX-11P7K-1326-SM-5BC5G 60.3
GTEX-117YX-1626-SM-5GZZG 60.1
GTEX-T6MO-0526-SM-4DM6R 60.0
GTEX-13FTX-0526-SM-5IFGS 59.9
GTEX-14E1K-1226-SM-5S2PD 59.9
GTEX-Z9EW-0526-SM-5HL8S 59.7
GTEX-145LT-1126-SM-5LUA1 59.6
GTEX-YEC3-2526-SM-4YCDN 59.6
GTEX-TML8-1526-SM-4DXUX 59.5
GTEX-Q2AI-0626-SM-48TZU 59.2
GTEX-RTLS-1126-SM-46MUQ 59.0
GTEX-131XE-1426-SM-5HL7V 58.8
GTEX-S3XE-0926-SM-4AD4S 58.8
GTEX-11TT1-0526-SM-5P9JO 58.4
GTEX-ZF2S-1226-SM-4WWAX 58.4
GTEX-131XG-1026-SM-5GCMX 58.2
GTEX-14AS3-0626-SM-5QGQD 57.8
GTEX-R53T-1126-SM-48FD4 57.6
GTEX-V1D1-1026-SM-4JBHE 57.5
GTEX-132AR-2226-SM-5J2NT 57.4
GTEX-ZG7Y-1126-SM-4WWEZ 57.1
GTEX-OIZH-0626-SM-3NB1L 56.5
GTEX-RM2N-0726-SM-48FD5 56.3
GTEX-11DXZ-1226-SM-5H11L 56.2
GTEX-11ONC-1526-SM-5GU6S 55.9
GTEX-R55G-1026-SM-48FDI 55.4
GTEX-WEY5-0926-SM-4LMI4 54.9
GTEX-ZQUD-0426-SM-57WFR 53.8
GTEX-ZT9W-1326-SM-51MTB 53.8
GTEX-OXRK-1326-SM-3NB1A 52.9
GTEX-139YR-1726-SM-5IFFK 52.7
GTEX-YFC4-1226-SM-5LU9R 52.6
GTEX-13PVR-1826-SM-5Q5CC 51.9
GTEX-1399R-0826-SM-5IJEL 51.7
GTEX-ZYWO-1026-SM-5E45U 51.2
GTEX-Y3IK-1126-SM-51MSV 48.3
GTEX-11DXY-1426-SM-5N9CN 44.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

93.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 93.9
FF:10015-101C6 68,74,75 years, mixed 93.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.