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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:62.7TPM
GTEx:53.3RPKM
FANTOM5:134.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA057242

 

Antibody CAB011235

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

62.7

overview Male, age 65
Sample 1
TPM: 52.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 61.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 62.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 74.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

53.3

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 53.3
Samples: 88

Max RPKM: 87.5
Min RPKM: 28.2
Std RPKM: 12.3
Median RPKM: 54.3
GTEX-13OVI-1926-SM-5IJCG 87.5
GTEX-133LE-1426-SM-5IFH1 80.4
GTEX-14DAR-1426-SM-5RQIR 73.0
GTEX-WQUQ-2426-SM-4MVNW 72.6
GTEX-1192X-2526-SM-59868 71.8
GTEX-ZTX8-0526-SM-59HLD 71.5
GTEX-XBED-1426-SM-4AT4G 70.1
GTEX-111YS-1426-SM-5GID8 69.7
GTEX-YB5E-1526-SM-5IFIE 69.7
GTEX-Y5LM-1626-SM-4VDTB 69.5
GTEX-1122O-1326-SM-5H11F 69.2
GTEX-ZTSS-0926-SM-59865 69.0
GTEX-ZYFG-2026-SM-5E43Y 68.6
GTEX-WFG8-1626-SM-4LVMB 68.0
GTEX-ZVZP-1826-SM-5GZXB 67.3
GTEX-YF7O-1826-SM-5IFIU 66.3
GTEX-ZTPG-2626-SM-57WFX 66.1
GTEX-13CF3-1226-SM-5LZXN 66.1
GTEX-13FTW-2026-SM-5IJE2 64.8
GTEX-ZPCL-1726-SM-57WEO 63.1
GTEX-111CU-1326-SM-5NQ8L 62.5
GTEX-XUZC-1426-SM-4BRV3 61.9
GTEX-YEC4-1726-SM-4W21E 61.5
GTEX-145LT-1026-SM-5LU9O 60.2
GTEX-XXEK-1026-SM-4BRUW 60.2
GTEX-ZXES-1526-SM-5NQ95 60.2
GTEX-ZA64-1226-SM-5HL7B 59.8
GTEX-13RTK-0826-SM-5Q5C6 59.6
GTEX-ZLV1-1126-SM-4WWBW 59.6
GTEX-Y9LG-1626-SM-5IFHM 59.3
GTEX-Y114-1426-SM-4TT6W 58.9
GTEX-11DXX-1626-SM-5H11H 58.6
GTEX-11EQ9-1326-SM-5985X 57.6
GTEX-ZYWO-1526-SM-5SIAL 56.9
GTEX-XAJ8-0526-SM-47JYK 56.4
GTEX-13PL7-2626-SM-5IFH4 56.4
GTEX-131XF-1326-SM-5GCMQ 56.1
GTEX-11I78-1126-SM-5A5K5 56.1
GTEX-ZZ64-0526-SM-5GZXM 56.0
GTEX-13D11-0726-SM-5LZZB 55.2
GTEX-13113-1226-SM-5EGHT 55.2
GTEX-11DXZ-1326-SM-5H11X 55.1
GTEX-ZVT2-2126-SM-5NQ93 54.6
GTEX-139T6-1026-SM-5IJGC 54.4
GTEX-XGQ4-1326-SM-4GIDU 54.2
GTEX-13QBU-1926-SM-5IJEW 53.9
GTEX-XMK1-1826-SM-4B66F 53.4
GTEX-13111-1426-SM-5DUW3 53.1
GTEX-12WSK-1526-SM-5CVNO 52.3
GTEX-ZQUD-0926-SM-57WE3 50.7
GTEX-117YX-0326-SM-5GICL 50.1
GTEX-11P7K-1626-SM-5GU63 50.0
GTEX-WFG7-1726-SM-4LVME 49.8
GTEX-148VJ-2226-SM-5NQ9M 49.1
GTEX-139YR-2226-SM-5IFFW 48.6
GTEX-ZPIC-2326-SM-57WDW 48.5
GTEX-1399R-2026-SM-5K7WN 48.2
GTEX-131XG-1726-SM-5LZUR 47.6
GTEX-X5EB-1626-SM-4E3IV 47.0
GTEX-13O21-1026-SM-5IJDU 46.8
GTEX-1399S-2026-SM-5KM4B 46.4
GTEX-ZVP2-1726-SM-5GU5P 46.1
GTEX-Y3IK-1726-SM-4YCCR 45.6
GTEX-ZC5H-2326-SM-4WAYT 45.2
GTEX-ZEX8-1826-SM-57WBH 44.1
GTEX-ZF2S-1726-SM-57WFT 43.4
GTEX-12BJ1-1926-SM-5HL9Z 43.2
GTEX-ZP4G-1626-SM-57WGD 42.0
GTEX-145ME-0926-SM-5O9AR 41.6
GTEX-14E6E-1626-SM-5RQI7 41.5
GTEX-VUSG-1726-SM-4KKZL 40.8
GTEX-ZQG8-2526-SM-57WEQ 40.3
GTEX-11XUK-1426-SM-5EQMG 40.1
GTEX-13FH7-1226-SM-5IJFK 39.3
GTEX-1399U-2126-SM-5IFEZ 38.1
GTEX-Z9EW-0926-SM-5CVMM 37.7
GTEX-ZLFU-1526-SM-4WWBT 37.6
GTEX-13O61-1326-SM-5KM31 37.5
GTEX-VJYA-0926-SM-4KL1N 36.7
GTEX-11NSD-1726-SM-5N9C3 36.3
GTEX-UPK5-2026-SM-4JBIM 35.9
GTEX-WH7G-1626-SM-4LVMY 35.7
GTEX-11P82-0826-SM-5P9GU 35.6
GTEX-WFJO-0926-SM-4LVM2 34.8
GTEX-WRHK-1026-SM-4MVOD 34.5
GTEX-WEY5-1526-SM-4LMJF 33.4
GTEX-X15G-1426-SM-4PQZK 32.8
GTEX-11VI4-1626-SM-5EQKO 28.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

134.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 134.0
FF:10024-101D6 15,40,85 years, mixed 134.0

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