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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:124.0TPM
GTEx:38.2RPKM
FANTOM5:193.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA014060

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

124.0

overview Male, age 65
Sample 1
TPM: 107.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 123.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 131.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 133.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

38.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 38.2
Samples: 88

Max RPKM: 67.7
Min RPKM: 25.8
Std RPKM: 8.4
Median RPKM: 36.3
GTEX-WFG8-1626-SM-4LVMB 67.7
GTEX-XGQ4-1326-SM-4GIDU 65.1
GTEX-13RTK-0826-SM-5Q5C6 56.3
GTEX-ZXES-1526-SM-5NQ95 55.0
GTEX-139YR-2226-SM-5IFFW 54.4
GTEX-145LT-1026-SM-5LU9O 54.2
GTEX-13FTW-2026-SM-5IJE2 53.0
GTEX-Y5LM-1626-SM-4VDTB 51.3
GTEX-ZP4G-1626-SM-57WGD 50.4
GTEX-133LE-1426-SM-5IFH1 50.3
GTEX-ZYFG-2026-SM-5E43Y 48.4
GTEX-ZLV1-1126-SM-4WWBW 48.2
GTEX-ZVT2-2126-SM-5NQ93 47.8
GTEX-13D11-0726-SM-5LZZB 45.8
GTEX-ZYWO-1526-SM-5SIAL 45.3
GTEX-131XF-1326-SM-5GCMQ 44.7
GTEX-ZTX8-0526-SM-59HLD 44.3
GTEX-YB5E-1526-SM-5IFIE 44.2
GTEX-ZTPG-2626-SM-57WFX 44.0
GTEX-14DAR-1426-SM-5RQIR 43.1
GTEX-139T6-1026-SM-5IJGC 42.7
GTEX-VJYA-0926-SM-4KL1N 41.9
GTEX-13113-1226-SM-5EGHT 41.9
GTEX-ZPIC-2326-SM-57WDW 41.8
GTEX-XAJ8-0526-SM-47JYK 40.5
GTEX-ZZ64-0526-SM-5GZXM 40.4
GTEX-131XG-1726-SM-5LZUR 40.1
GTEX-ZQG8-2526-SM-57WEQ 39.8
GTEX-ZVP2-1726-SM-5GU5P 39.8
GTEX-11EQ9-1326-SM-5985X 39.5
GTEX-13PL7-2626-SM-5IFH4 39.3
GTEX-XBED-1426-SM-4AT4G 39.2
GTEX-1122O-1326-SM-5H11F 38.9
GTEX-YEC4-1726-SM-4W21E 38.9
GTEX-11P82-0826-SM-5P9GU 38.7
GTEX-XXEK-1026-SM-4BRUW 38.6
GTEX-111CU-1326-SM-5NQ8L 38.0
GTEX-ZA64-1226-SM-5HL7B 37.8
GTEX-13O21-1026-SM-5IJDU 37.6
GTEX-WFG7-1726-SM-4LVME 37.5
GTEX-145ME-0926-SM-5O9AR 37.2
GTEX-ZPCL-1726-SM-57WEO 36.8
GTEX-11DXZ-1326-SM-5H11X 36.4
GTEX-X5EB-1626-SM-4E3IV 36.4
GTEX-WRHK-1026-SM-4MVOD 36.3
GTEX-Y3IK-1726-SM-4YCCR 36.1
GTEX-13O61-1326-SM-5KM31 36.0
GTEX-XUZC-1426-SM-4BRV3 35.9
GTEX-11I78-1126-SM-5A5K5 35.7
GTEX-148VJ-2226-SM-5NQ9M 35.7
GTEX-11DXX-1626-SM-5H11H 35.4
GTEX-11P7K-1626-SM-5GU63 35.3
GTEX-ZF2S-1726-SM-57WFT 35.2
GTEX-12WSK-1526-SM-5CVNO 35.1
GTEX-1399R-2026-SM-5K7WN 35.0
GTEX-ZQUD-0926-SM-57WE3 34.8
GTEX-11NSD-1726-SM-5N9C3 34.8
GTEX-ZVZP-1826-SM-5GZXB 34.6
GTEX-ZLFU-1526-SM-4WWBT 34.6
GTEX-Y9LG-1626-SM-5IFHM 34.5
GTEX-1399U-2126-SM-5IFEZ 34.3
GTEX-ZTSS-0926-SM-59865 34.1
GTEX-13CF3-1226-SM-5LZXN 34.0
GTEX-ZEX8-1826-SM-57WBH 34.0
GTEX-1192X-2526-SM-59868 33.7
GTEX-1399S-2026-SM-5KM4B 33.6
GTEX-13QBU-1926-SM-5IJEW 32.9
GTEX-Z9EW-0926-SM-5CVMM 32.9
GTEX-14E6E-1626-SM-5RQI7 32.7
GTEX-X15G-1426-SM-4PQZK 32.4
GTEX-117YX-0326-SM-5GICL 31.3
GTEX-11XUK-1426-SM-5EQMG 30.5
GTEX-Y114-1426-SM-4TT6W 30.5
GTEX-UPK5-2026-SM-4JBIM 30.3
GTEX-13111-1426-SM-5DUW3 30.1
GTEX-12BJ1-1926-SM-5HL9Z 29.9
GTEX-WFJO-0926-SM-4LVM2 29.0
GTEX-WEY5-1526-SM-4LMJF 28.6
GTEX-11VI4-1626-SM-5EQKO 28.5
GTEX-XMK1-1826-SM-4B66F 28.4
GTEX-111YS-1426-SM-5GID8 28.2
GTEX-13FH7-1226-SM-5IJFK 27.1
GTEX-YF7O-1826-SM-5IFIU 26.9
GTEX-WH7G-1626-SM-4LVMY 26.7
GTEX-ZC5H-2326-SM-4WAYT 26.2
GTEX-WQUQ-2426-SM-4MVNW 26.1
GTEX-VUSG-1726-SM-4KKZL 26.0
GTEX-13OVI-1926-SM-5IJCG 25.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

193.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 193.7
FF:10024-101D6 15,40,85 years, mixed 193.7

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