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SF3B2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:90.8TPM
GTEx:50.6RPKM
FANTOM5:165.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:High
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA045028

  

Adipocytes

 Medium  

Chondrocytes

 High  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA045028

  

Adipocytes

 Medium  

Chondrocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

90.8
N/A Female, age 80
Sample 1
TPM: 104.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 73.2
N/A Female, age 57
Sample 3
TPM: 69.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 117.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 89.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

50.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 54.5
Samples: 350

Max RPKM: 73.7
Min RPKM: 37.3
Std RPKM: 6.2
Median RPKM: 54.5
GTEX-RVPU-2326-SM-2TF6R 73.7
GTEX-11EMC-2826-SM-5PNY6 72.9
GTEX-13RTJ-2526-SM-5S2Q3 71.9
GTEX-S7SF-1826-SM-3K2AD 70.2
GTEX-QESD-1526-SM-2S1QT 70.1
GTEX-14BIL-0226-SM-5SI9E 70.0
GTEX-13OVI-1326-SM-5IJBO 69.9
GTEX-P4QT-0226-SM-3LK68 69.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 44.6
Samples: 227

Max RPKM: 72.1
Min RPKM: 27.2
Std RPKM: 6.7
Median RPKM: 44
GTEX-ZYVF-1026-SM-5E44V 72.1
GTEX-145MI-0826-SM-5SI95 64.7
GTEX-13IVO-2426-SM-5K7V9 63.4
GTEX-13PVQ-2226-SM-5L3G9 61.7
GTEX-ZAJG-1626-SM-5HL7I 58.4
GTEX-ZE7O-1526-SM-5J1NH 57.6
GTEX-13OW7-1126-SM-5K7V6 57.2
GTEX-YJ89-1926-SM-5IFJ6 56.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

165.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 165.5
FF:10010-101C1 65,65,76 years, mixed 165.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.