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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:40.4RPKM
FANTOM5:191.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA045028

 

Glial cells

High  

Neuronal cells

High  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

40.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 40.4
Samples: 117

Max RPKM: 71.2
Min RPKM: 14.1
Std RPKM: 11.3
Median RPKM: 41.2
GTEX-132Q8-0011-R5a-SM-5IJDM 71.2
GTEX-X585-0011-R5A-SM-46MVI 67.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 62.4
GTEX-P44H-0011-R5A-SM-2XCEX 59.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 59.2
GTEX-13NYS-0011-R5a-SM-5MR4D 58.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 58.2
GTEX-13G51-0011-R5a-SM-5L3EB 57.9
GTEX-X4XX-0011-R5A-SM-46MWN 56.1
GTEX-TSE9-0011-R5A-SM-3DB7J 54.1
GTEX-13X6K-0011-R5b-SM-5PNUE 53.7
GTEX-QVJO-0011-R5A-SM-2S1QM 52.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 52.7
GTEX-1399T-0011-R5b-SM-5IJDK 52.6
GTEX-T5JC-0011-R5A-SM-32PLK 52.6
GTEX-T6MN-0011-R5A-SM-32QPD 52.3
GTEX-WL46-0011-R5A-SM-3LK6V 51.9
GTEX-11H98-0011-R5b-SM-57WCF 51.4
GTEX-12WSF-0011-R5a-SM-5HL8K 51.4
GTEX-N7MT-0011-R5a-SM-2I3G6 51.1
GTEX-XMD1-0011-R5A-SM-4AT47 50.9
GTEX-14BIM-0011-R5b-SM-5S2RM 50.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 49.7
GTEX-UTHO-0011-R5A-SM-3GIJD 49.5
GTEX-ZUA1-0011-R5b-SM-51MTG 49.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 49.2
GTEX-S7SE-0011-R5A-SM-2XCDA 49.2
GTEX-11GSP-0011-R5a-SM-57WBE 48.7
GTEX-13X6I-0011-R5a-SM-5PNWW 48.7
GTEX-R55E-0011-R5A-SM-2TC5N 48.5
GTEX-11OF3-0011-R5a-SM-57WB4 48.2
GTEX-13SLX-0011-R5a-SM-5O9BV 48.2
GTEX-N7MS-0011-R5a-SM-2HMK8 48.2
GTEX-12WSC-0011-R5b-SM-5CVNS 47.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 46.7
GTEX-12WSA-0011-R5b-SM-5GU5I 46.0
GTEX-131YS-0011-R5b-SM-5K7YB 46.0
GTEX-13O3O-0011-R5b-SM-5KM44 45.3
GTEX-WWYW-0011-R5A-SM-3NB3E 45.3
GTEX-13FLV-0011-R5a-SM-5LZWT 45.1
GTEX-13OW6-0011-R5a-SM-5O9BK 44.9
GTEX-145MH-0011-R5a-SM-5P9JT 44.4
GTEX-WVLH-0011-R5A-SM-3MJFW 44.4
GTEX-14ABY-0011-R5b-SM-5SI7B 44.0
GTEX-T2IS-0011-R5A-SM-32QP4 43.8
GTEX-1313W-0011-R5b-SM-5L3EP 43.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 43.4
GTEX-13FXS-0011-R5b-SM-5LZYE 43.2
GTEX-145LS-0011-R5a-SM-5SI65 42.9
GTEX-13JUV-0011-R5a-SM-5LZY5 42.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 42.7
GTEX-13VXU-0011-R5a-SM-5O9D7 42.7
GTEX-RVPV-0011-R5A-SM-2TF69 42.5
GTEX-13NYB-0011-R5a-SM-5MR45 41.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 41.7
GTEX-RU72-0011-R5A-SM-2TF6U 41.4
GTEX-PVOW-0011-R5A-SM-32PL7 41.3
GTEX-WZTO-0011-R5B-SM-3NMC5 41.3
GTEX-13X6J-0011-R5b-SM-5PNWT 41.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 41.1
GTEX-139TT-0011-R5b-SM-5K7W8 40.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40.9
GTEX-13CZV-0011-R5a-SM-5K7XA 40.8
GTEX-Z93S-0011-R5b-SM-4RGNI 40.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 40.7
GTEX-13OW5-0011-R5b-SM-5L3FR 40.5
GTEX-OHPN-0011-R5A-SM-2I5FF 40.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 39.7
GTEX-RVPU-0011-R5A-SM-2XCAD 39.7
GTEX-11NV4-0011-R5a-SM-5NQ88 39.5
GTEX-13OVL-0011-R5b-SM-5L3FU 38.6
GTEX-QMR6-0011-R5A-SM-32PKT 38.5
GTEX-13JVG-0011-R5a-SM-5MR4O 38.3
GTEX-12WSB-0011-R5b-SM-5GU67 37.4
GTEX-13OW7-0011-R5b-SM-5O9DM 37.0
GTEX-13FLW-0011-R5a-SM-5LZX6 36.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 36.4
GTEX-13S7M-0011-R5b-SM-5P9HS 36.3
GTEX-144GO-0011-R5a-SM-5PNUR 36.3
GTEX-X261-0011-R5A-SM-3NMB4 36.0
GTEX-139T8-0011-R5b-SM-5J1MO 35.6
GTEX-YFC4-0011-R5a-SM-4RGLR 35.2
GTEX-ZE7O-0011-R5a-SM-57WBO 35.1
GTEX-13OVH-0011-R5b-SM-5KM4L 34.8
GTEX-XOTO-0011-R5A-SM-4B657 34.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 34.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 34.5
GTEX-139TS-0011-R5b-SM-5J2MZ 34.4
GTEX-NL4W-0011-R5a-SM-2I3GD 34.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 34.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 32.3
GTEX-NL3H-0011-R5a-SM-2I3GB 31.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 30.8
GTEX-12WSD-0011-R5b-SM-5CVNG 29.8
GTEX-ZXG5-0011-R5b-SM-57WBN 29.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 29.0
GTEX-NPJ7-0011-R5a-SM-33HBK 28.1
GTEX-13CIG-0011-R5b-SM-5L3F2 28.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 27.9
GTEX-14BIN-0011-R5b-SM-5SI78 27.9
GTEX-12ZZX-0011-R5a-SM-5HL89 27.0
GTEX-144GL-0011-R5b-SM-5PNUJ 26.6
GTEX-OXRN-0011-R5A-SM-2I5EF 26.2
GTEX-1445S-0011-R5a-SM-5PNUS 25.2
GTEX-11WQC-0011-R5a-SM-5BC74 24.3
GTEX-ZVT3-0011-R5a-SM-51MSI 23.2
GTEX-ZV68-0011-R5a-SM-4YCDW 23.1
GTEX-13CF2-0011-R5a-SM-5LZWS 21.8
GTEX-11UD1-0011-R5b-SM-5P9FP 20.9
GTEX-13112-0011-R5b-SM-5DUV8 20.6
GTEX-YJ89-0011-R5a-SM-4V6GM 20.3
GTEX-12WSH-0011-R5b-SM-5P9F3 20.1
GTEX-13FHP-0011-R5b-SM-5LZY2 19.1
GTEX-S7PM-0011-R5A-SM-3NM8G 17.7
GTEX-1477Z-0011-R5b-SM-5PNUO 17.4
GTEX-145MG-0011-R5b-SM-5S2VU 15.8
GTEX-13NZA-0011-R5b-SM-5KM4K 14.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

191.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 191.9
FF:10379-105H1 89 years, female 192.5
FF:10164-103B2 76 years, female 191.4

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