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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:74.4TPM
GTEx:46.0RPKM
FANTOM5:198.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA045028

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

74.4

overview Male, age 65
Sample 1
TPM: 73.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 73.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 74.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 76.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

46.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 46.0
Samples: 88

Max RPKM: 74.4
Min RPKM: 32.1
Std RPKM: 8.3
Median RPKM: 44.4
GTEX-131XG-1726-SM-5LZUR 74.4
GTEX-VUSG-1726-SM-4KKZL 69.5
GTEX-UPK5-2026-SM-4JBIM 67.5
GTEX-WH7G-1626-SM-4LVMY 63.2
GTEX-11NSD-1726-SM-5N9C3 62.3
GTEX-11VI4-1626-SM-5EQKO 61.2
GTEX-X15G-1426-SM-4PQZK 60.4
GTEX-Z9EW-0926-SM-5CVMM 58.7
GTEX-ZP4G-1626-SM-57WGD 58.6
GTEX-ZVP2-1726-SM-5GU5P 55.4
GTEX-ZEX8-1826-SM-57WBH 54.8
GTEX-11P82-0826-SM-5P9GU 54.1
GTEX-13O61-1326-SM-5KM31 54.0
GTEX-WFJO-0926-SM-4LVM2 53.3
GTEX-Y5LM-1626-SM-4VDTB 52.8
GTEX-12BJ1-1926-SM-5HL9Z 52.6
GTEX-XAJ8-0526-SM-47JYK 52.4
GTEX-WFG8-1626-SM-4LVMB 52.2
GTEX-13FH7-1226-SM-5IJFK 51.4
GTEX-148VJ-2226-SM-5NQ9M 50.8
GTEX-11XUK-1426-SM-5EQMG 50.7
GTEX-ZVT2-2126-SM-5NQ93 50.6
GTEX-117YX-0326-SM-5GICL 50.0
GTEX-XGQ4-1326-SM-4GIDU 49.9
GTEX-WRHK-1026-SM-4MVOD 49.7
GTEX-1192X-2526-SM-59868 49.5
GTEX-13RTK-0826-SM-5Q5C6 49.4
GTEX-13QBU-1926-SM-5IJEW 49.1
GTEX-ZLFU-1526-SM-4WWBT 49.0
GTEX-145ME-0926-SM-5O9AR 48.6
GTEX-1399U-2126-SM-5IFEZ 48.4
GTEX-13111-1426-SM-5DUW3 47.8
GTEX-Y114-1426-SM-4TT6W 47.4
GTEX-11P7K-1626-SM-5GU63 46.9
GTEX-14E6E-1626-SM-5RQI7 46.6
GTEX-1399S-2026-SM-5KM4B 46.6
GTEX-11EQ9-1326-SM-5985X 46.5
GTEX-WEY5-1526-SM-4LMJF 46.4
GTEX-11DXX-1626-SM-5H11H 46.2
GTEX-ZTPG-2626-SM-57WFX 46.2
GTEX-ZZ64-0526-SM-5GZXM 45.5
GTEX-XUZC-1426-SM-4BRV3 45.4
GTEX-111CU-1326-SM-5NQ8L 44.5
GTEX-ZYWO-1526-SM-5SIAL 44.5
GTEX-ZQG8-2526-SM-57WEQ 44.2
GTEX-131XF-1326-SM-5GCMQ 44.2
GTEX-13FTW-2026-SM-5IJE2 43.5
GTEX-11I78-1126-SM-5A5K5 43.4
GTEX-ZF2S-1726-SM-57WFT 43.3
GTEX-ZC5H-2326-SM-4WAYT 43.1
GTEX-139T6-1026-SM-5IJGC 43.1
GTEX-XBED-1426-SM-4AT4G 42.9
GTEX-145LT-1026-SM-5LU9O 42.3
GTEX-VJYA-0926-SM-4KL1N 42.2
GTEX-XXEK-1026-SM-4BRUW 42.0
GTEX-13O21-1026-SM-5IJDU 41.9
GTEX-13OVI-1926-SM-5IJCG 41.7
GTEX-ZTX8-0526-SM-59HLD 41.4
GTEX-14DAR-1426-SM-5RQIR 41.3
GTEX-ZXES-1526-SM-5NQ95 41.2
GTEX-ZLV1-1126-SM-4WWBW 41.0
GTEX-ZVZP-1826-SM-5GZXB 40.9
GTEX-ZA64-1226-SM-5HL7B 40.9
GTEX-12WSK-1526-SM-5CVNO 40.7
GTEX-YB5E-1526-SM-5IFIE 40.4
GTEX-WFG7-1726-SM-4LVME 40.3
GTEX-ZQUD-0926-SM-57WE3 40.3
GTEX-13113-1226-SM-5EGHT 40.2
GTEX-13CF3-1226-SM-5LZXN 40.2
GTEX-139YR-2226-SM-5IFFW 40.0
GTEX-Y3IK-1726-SM-4YCCR 40.0
GTEX-ZYFG-2026-SM-5E43Y 39.5
GTEX-133LE-1426-SM-5IFH1 39.4
GTEX-WQUQ-2426-SM-4MVNW 39.0
GTEX-1122O-1326-SM-5H11F 38.5
GTEX-11DXZ-1326-SM-5H11X 37.4
GTEX-ZTSS-0926-SM-59865 37.4
GTEX-13D11-0726-SM-5LZZB 37.2
GTEX-ZPIC-2326-SM-57WDW 37.0
GTEX-XMK1-1826-SM-4B66F 36.9
GTEX-1399R-2026-SM-5K7WN 36.5
GTEX-ZPCL-1726-SM-57WEO 36.2
GTEX-111YS-1426-SM-5GID8 35.1
GTEX-Y9LG-1626-SM-5IFHM 34.3
GTEX-YF7O-1826-SM-5IFIU 34.1
GTEX-X5EB-1626-SM-4E3IV 33.6
GTEX-YEC4-1726-SM-4W21E 32.1
GTEX-13PL7-2626-SM-5IFH4 32.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

198.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 198.7
FF:10024-101D6 15,40,85 years, mixed 198.7

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