Fields »
ABOUT
HELP
BLOG
AAMDC

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:82.3TPM
GTEx:14.8RPKM
FANTOM5:25.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
 
 
 

Antibody staining

Antibody HPA037918

  

Antibody HPA037919

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Low   Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA037918

  

Antibody HPA037919

  

Adipocytes

 Low   Not detected  

Chondrocytes

 Medium   Not detected  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

82.3
N/A Female, age 80
Sample 1
TPM: 101.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 103.4
N/A Female, age 57
Sample 3
TPM: 97.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 49.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 59.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.6
Samples: 350

Max RPKM: 45.4
Min RPKM: 6.9
Std RPKM: 4.5
Median RPKM: 14.8
GTEX-Y5V6-2526-SM-5IFJV 45.4
GTEX-ZAK1-0226-SM-5CVMX 29.6
GTEX-147F3-0626-SM-5NQ9I 28.7
GTEX-145ME-1926-SM-5SI9S 28.5
GTEX-13D11-2326-SM-5IJCY 26.6
GTEX-12126-0426-SM-5Q5AP 26.3
GTEX-YJ8O-2426-SM-5HL7S 26.3
GTEX-X15G-2326-SM-4PQZS 26.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.5
Samples: 227

Max RPKM: 30
Min RPKM: 5.8
Std RPKM: 4.1
Median RPKM: 12.8
GTEX-12WSC-1726-SM-5GCN3 30.0
GTEX-1212Z-0526-SM-5FQSQ 28.2
GTEX-ZYT6-2126-SM-5GZZ4 23.8
GTEX-13112-1126-SM-5GCMY 23.2
GTEX-ZP4G-1326-SM-5EGIW 22.8
GTEX-Y5V5-0226-SM-5S2N8 22.7
GTEX-131XH-0826-SM-5GCN8 22.5
GTEX-13G51-0526-SM-5IJCQ 22.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

25.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 25.9
FF:10010-101C1 65,65,76 years, mixed 25.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.