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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:159.0TPM
GTEx:72.9RPKM
FANTOM5:509.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA048886

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

159.0

overview Male, age 65
Sample 1
TPM: 142.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 189.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 158.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 146.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

72.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 72.9
Samples: 88

Max RPKM: 152.9
Min RPKM: 15.3
Std RPKM: 37.9
Median RPKM: 69.2
GTEX-YB5E-1526-SM-5IFIE 152.9
GTEX-14DAR-1426-SM-5RQIR 152.4
GTEX-ZLV1-1126-SM-4WWBW 146.1
GTEX-XUZC-1426-SM-4BRV3 138.9
GTEX-1122O-1326-SM-5H11F 132.6
GTEX-111YS-1426-SM-5GID8 132.4
GTEX-YF7O-1826-SM-5IFIU 132.0
GTEX-ZPCL-1726-SM-57WEO 129.6
GTEX-WQUQ-2426-SM-4MVNW 121.3
GTEX-13D11-0726-SM-5LZZB 117.8
GTEX-YEC4-1726-SM-4W21E 116.7
GTEX-XGQ4-1326-SM-4GIDU 116.6
GTEX-11EQ9-1326-SM-5985X 115.2
GTEX-131XF-1326-SM-5GCMQ 114.7
GTEX-ZTSS-0926-SM-59865 113.2
GTEX-ZYFG-2026-SM-5E43Y 113.1
GTEX-145LT-1026-SM-5LU9O 112.0
GTEX-ZZ64-0526-SM-5GZXM 111.7
GTEX-ZA64-1226-SM-5HL7B 111.1
GTEX-11DXX-1626-SM-5H11H 109.7
GTEX-13FTW-2026-SM-5IJE2 109.3
GTEX-ZTX8-0526-SM-59HLD 108.2
GTEX-ZXES-1526-SM-5NQ95 105.9
GTEX-11I78-1126-SM-5A5K5 105.0
GTEX-13PL7-2626-SM-5IFH4 104.5
GTEX-11P7K-1626-SM-5GU63 102.0
GTEX-XBED-1426-SM-4AT4G 99.5
GTEX-ZVZP-1826-SM-5GZXB 96.9
GTEX-11DXZ-1326-SM-5H11X 96.5
GTEX-Y9LG-1626-SM-5IFHM 96.4
GTEX-ZYWO-1526-SM-5SIAL 96.1
GTEX-14E6E-1626-SM-5RQI7 94.7
GTEX-13113-1226-SM-5EGHT 92.3
GTEX-X5EB-1626-SM-4E3IV 91.9
GTEX-1399R-2026-SM-5K7WN 88.5
GTEX-133LE-1426-SM-5IFH1 87.0
GTEX-1399S-2026-SM-5KM4B 86.4
GTEX-13CF3-1226-SM-5LZXN 84.2
GTEX-XXEK-1026-SM-4BRUW 81.6
GTEX-139YR-2226-SM-5IFFW 79.0
GTEX-11P82-0826-SM-5P9GU 73.8
GTEX-139T6-1026-SM-5IJGC 70.8
GTEX-WFG7-1726-SM-4LVME 70.8
GTEX-ZVP2-1726-SM-5GU5P 69.4
GTEX-ZEX8-1826-SM-57WBH 69.0
GTEX-ZTPG-2626-SM-57WFX 66.8
GTEX-13RTK-0826-SM-5Q5C6 63.8
GTEX-XAJ8-0526-SM-47JYK 60.8
GTEX-Y114-1426-SM-4TT6W 60.5
GTEX-ZVT2-2126-SM-5NQ93 60.3
GTEX-13FH7-1226-SM-5IJFK 58.4
GTEX-ZLFU-1526-SM-4WWBT 57.1
GTEX-WFJO-0926-SM-4LVM2 52.6
GTEX-13O61-1326-SM-5KM31 51.2
GTEX-ZPIC-2326-SM-57WDW 51.2
GTEX-12BJ1-1926-SM-5HL9Z 50.9
GTEX-11NSD-1726-SM-5N9C3 50.0
GTEX-VJYA-0926-SM-4KL1N 49.2
GTEX-Y3IK-1726-SM-4YCCR 48.6
GTEX-WH7G-1626-SM-4LVMY 47.8
GTEX-WFG8-1626-SM-4LVMB 40.3
GTEX-11XUK-1426-SM-5EQMG 38.7
GTEX-ZF2S-1726-SM-57WFT 36.2
GTEX-Z9EW-0926-SM-5CVMM 36.0
GTEX-1399U-2126-SM-5IFEZ 36.0
GTEX-111CU-1326-SM-5NQ8L 35.7
GTEX-WRHK-1026-SM-4MVOD 34.3
GTEX-13O21-1026-SM-5IJDU 33.2
GTEX-117YX-0326-SM-5GICL 32.7
GTEX-13111-1426-SM-5DUW3 30.9
GTEX-1192X-2526-SM-59868 30.8
GTEX-ZQUD-0926-SM-57WE3 30.8
GTEX-XMK1-1826-SM-4B66F 30.5
GTEX-ZP4G-1626-SM-57WGD 30.4
GTEX-13OVI-1926-SM-5IJCG 30.4
GTEX-131XG-1726-SM-5LZUR 30.3
GTEX-145ME-0926-SM-5O9AR 30.0
GTEX-Y5LM-1626-SM-4VDTB 29.9
GTEX-11VI4-1626-SM-5EQKO 29.8
GTEX-13QBU-1926-SM-5IJEW 28.7
GTEX-12WSK-1526-SM-5CVNO 28.3
GTEX-WEY5-1526-SM-4LMJF 27.8
GTEX-ZQG8-2526-SM-57WEQ 25.5
GTEX-ZC5H-2326-SM-4WAYT 22.9
GTEX-X15G-1426-SM-4PQZK 22.3
GTEX-148VJ-2226-SM-5NQ9M 21.6
GTEX-VUSG-1726-SM-4KKZL 18.7
GTEX-UPK5-2026-SM-4JBIM 15.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

509.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 509.5
FF:10024-101D6 15,40,85 years, mixed 509.5

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