Tissue expression of USP48 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	26.0	TPM
GTEx:	11.7	RPKM
FANTOM5:	42.8	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

High

Antibody staining	Antibody HPA030045	Antibody HPA030046
Glandular cells	High	High

SMALL INTESTINE - HPA RNA-seq

Average TPM	26.0

Male, age 65

Sample 1
TPM: 28.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 23.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 26.3

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 26.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	11.7

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 11.7

Samples: 88

Max RPKM: 25.5
Min RPKM: 5.6
Std RPKM: 4.2
Median RPKM: 10.5

GTEX-148VJ-2226-SM-5NQ9M

25.5

GTEX-VUSG-1726-SM-4KKZL

21.3

GTEX-11VI4-1626-SM-5EQKO

21.3

GTEX-ZLFU-1526-SM-4WWBT

21.2

GTEX-12BJ1-1926-SM-5HL9Z

21.1

GTEX-1399U-2126-SM-5IFEZ

20.5

GTEX-13O61-1326-SM-5KM31

19.6

GTEX-11XUK-1426-SM-5EQMG

19.5

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	42.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 42.8

FF:10024-101D6

15,40,85 years, mixed

42.8