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TISSUE ATLAS PRIMARY DATA BREAST
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:45.8TPM
GTEx:24.3RPKM
FANTOM5:43.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Medium
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Adipocytes

Not detected   Not detected   Low   Not detected  

Glandular cells

Medium   Not detected   Medium   Not detected  

Myoepithelial cells

Not detected   Not detected   Medium   Medium  
       
       
       

BREAST - HPA RNA-seq

Average TPM

45.8

overview Female, age 52
Sample 1
TPM: 34.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 42.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 53.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 52.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

24.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 24.3
Samples: 214

Max RPKM: 43.7
Min RPKM: 12.1
Std RPKM: 5.9
Median RPKM: 23.1
GTEX-ZPIC-1126-SM-5BC7F 43.7
GTEX-WY7C-2726-SM-3NB3P 42.1
GTEX-11ZTT-2326-SM-5EQLG 41.0
GTEX-11P82-1326-SM-5HL62 40.4
GTEX-ZQG8-0726-SM-5P9H9 40.0
GTEX-YB5K-1626-SM-5IFIN 39.8
GTEX-13CF3-2126-SM-5IFJP 37.8
GTEX-117YX-1426-SM-5H12H 37.7
GTEX-11TT1-2126-SM-5GU5Y 37.5
GTEX-11TUW-1826-SM-5BC5D 36.0
GTEX-TKQ1-0226-SM-33HB5 35.0
GTEX-T5JW-2026-SM-4DM63 34.8
GTEX-XV7Q-2326-SM-4BRVZ 34.6
GTEX-11EQ9-1826-SM-5Q5AJ 34.3
GTEX-U8XE-0826-SM-4E3J1 34.1
GTEX-13FTX-1126-SM-5N9EN 33.7
GTEX-Y5V6-2126-SM-4WWFX 33.7
GTEX-ZYWO-2326-SM-5GZY4 33.7
GTEX-13FTW-1426-SM-5LZWZ 33.6
GTEX-ZTTD-1026-SM-51MRD 33.6
GTEX-ZY6K-1626-SM-5GZWV 33.4
GTEX-145ME-1526-SM-5Q5F2 33.0
GTEX-YB5E-1726-SM-5IFJ3 33.0
GTEX-ZDYS-1126-SM-5K7UB 32.9
GTEX-Y8E4-1626-SM-5S2MW 32.1
GTEX-14ABY-2126-SM-5QGQZ 31.6
GTEX-1211K-1926-SM-5EQLB 31.2
GTEX-SE5C-2126-SM-4BRUJ 31.1
GTEX-RUSQ-2026-SM-4GIAK 30.9
GTEX-XYKS-1326-SM-4BRUN 30.8
GTEX-Y114-2026-SM-4TT7L 30.8
GTEX-ZDXO-0126-SM-5S2ND 30.8
GTEX-ZLFU-2126-SM-4WWEV 30.8
GTEX-ZZ64-1226-SM-5E43R 30.4
GTEX-S33H-0326-SM-4AD6N 30.3
GTEX-X4XY-0926-SM-4E3JD 30.3
GTEX-132AR-0826-SM-5EGK6 30.2
GTEX-S4Q7-1126-SM-4AD6R 29.7
GTEX-13W3W-1226-SM-5LU4H 29.4
GTEX-VUSG-2226-SM-4KKZO 29.3
GTEX-YEC3-1026-SM-5IFI5 29.3
GTEX-XGQ4-0926-SM-4AT4U 29.2
GTEX-QEG5-0726-SM-4R1JQ 29.1
GTEX-ZAB4-2526-SM-5HL8M 29.1
GTEX-11DZ1-0326-SM-5N9BN 28.5
GTEX-REY6-2426-SM-48FF5 28.5
GTEX-ZT9W-2026-SM-51MRA 28.4
GTEX-146FH-0826-SM-5SI8T 28.2
GTEX-XQ3S-1326-SM-4BOPQ 28.2
GTEX-WFON-1826-SM-3GILG 28.0
GTEX-11I78-2226-SM-5PNYA 27.8
GTEX-13NZ9-1026-SM-5MR5K 27.8
GTEX-ZYT6-0126-SM-5E45J 27.8
GTEX-13FHO-0826-SM-5L3E8 27.7
GTEX-12WSM-1726-SM-5BC6J 27.3
GTEX-12WSN-1326-SM-5GCNT 27.2
GTEX-133LE-1726-SM-5K7VQ 27.2
GTEX-1399U-1826-SM-5PNZ1 27.2
GTEX-ZV6S-1826-SM-5NQ8D 27.2
GTEX-ZVT2-1826-SM-5NQ8W 26.9
GTEX-S32W-2026-SM-4AD6E 26.7
GTEX-XUZC-1626-SM-4BRVP 26.7
GTEX-ZU9S-1926-SM-5NQBP 26.7
GTEX-ZQUD-1926-SM-51MSA 26.6
GTEX-TKQ2-1826-SM-33HB2 26.5
GTEX-14E6E-1326-SM-5S2NR 26.4
GTEX-Y5LM-1726-SM-4VDSX 26.4
GTEX-145MO-0826-SM-5NQBL 26.3
GTEX-ZYFC-0826-SM-5E44K 26.2
GTEX-12WSK-2226-SM-5GCO5 26.1
GTEX-13O3O-0826-SM-5K7WE 26.1
GTEX-11ZUS-0826-SM-5FQUY 26.0
GTEX-VJWN-0726-SM-3GIJ8 25.9
GTEX-12KS4-0126-SM-5Q5A5 25.7
GTEX-144GM-0926-SM-5O994 25.7
GTEX-ZDTT-2126-SM-5S2OJ 25.6
GTEX-139T6-1626-SM-5PNYZ 25.4
GTEX-QEL4-2126-SM-447AE 25.4
GTEX-QMRM-1626-SM-4R1KV 25.4
GTEX-145LT-0726-SM-5S2VM 25.3
GTEX-PSDG-1626-SM-48TCQ 25.3
GTEX-R55D-0826-SM-48FEA 25.3
GTEX-Y9LG-1426-SM-5IFJZ 25.3
GTEX-11ONC-2126-SM-5HL6E 25.2
GTEX-XOT4-0726-SM-4GIAW 24.9
GTEX-1122O-1226-SM-5H113 24.8
GTEX-139TU-0626-SM-5KM3X 24.8
GTEX-13N11-1726-SM-5J1OJ 24.8
GTEX-1117F-2826-SM-5GZXL 24.7
GTEX-13113-1726-SM-5GCOO 24.7
GTEX-R53T-1526-SM-48FEK 24.7
GTEX-WXYG-2226-SM-4E3IM 24.7
GTEX-13S86-1226-SM-5S2OA 24.5
GTEX-ZVZQ-0826-SM-51MRF 24.2
GTEX-11O72-2126-SM-5N9FO 24.1
GTEX-11P81-1926-SM-5BC53 24.0
GTEX-145MN-1926-SM-5SIAI 23.9
GTEX-144GL-2026-SM-5LU3O 23.8
GTEX-11DXZ-1926-SM-5GZZL 23.7
GTEX-T6MO-0326-SM-32QOK 23.7
GTEX-ZVTK-0326-SM-51MRR 23.6
GTEX-13OW8-0226-SM-5K7UP 23.5
GTEX-YJ8O-2226-SM-5IFHW 23.4
GTEX-13CF2-2026-SM-5K7VI 23.3
GTEX-ZA64-1526-SM-5CVMD 23.3
GTEX-12BJ1-1826-SM-5HL9N 23.2
GTEX-XMK1-1126-SM-4IHJ8 23.1
GTEX-Y3IK-2326-SM-4WWDT 23.1
GTEX-W5X1-2326-SM-3GIL6 23.0
GTEX-11WQC-1726-SM-5GU4W 22.9
GTEX-ZV7C-1826-SM-5NQ83 22.9
GTEX-Y5V5-2126-SM-4WWFO 22.8
GTEX-14AS3-1626-SM-5S2OY 22.7
GTEX-11EMC-2026-SM-5A5JV 22.6
GTEX-11PRG-0826-SM-5EQ6A 22.6
GTEX-S341-1526-SM-4AD6K 22.6
GTEX-Y3I4-1526-SM-4TT7K 22.6
GTEX-T6MN-0726-SM-32PML 22.5
GTEX-X261-0626-SM-3NMD9 22.5
GTEX-13O61-1826-SM-5KM4I 22.4
GTEX-S4UY-0726-SM-4AD6X 22.3
GTEX-131YS-0626-SM-5EGKL 22.2
GTEX-ZTX8-1226-SM-4YCE9 22.1
GTEX-11P7K-0726-SM-5EGKX 22.0
GTEX-132NY-0826-SM-5K7Y7 22.0
GTEX-13D11-1026-SM-5IJFB 22.0
GTEX-SIU7-1626-SM-4BRUK 22.0
GTEX-11DXW-0626-SM-5N9ER 21.9
GTEX-WRHU-0326-SM-3MJFY 21.8
GTEX-ZAJG-0626-SM-5HL8X 21.7
GTEX-ZLV1-1426-SM-4WWES 21.7
GTEX-11DXY-2326-SM-5GICW 21.6
GTEX-147F4-2826-SM-5NQBN 21.6
GTEX-1313W-0826-SM-5EQ4T 21.5
GTEX-QDT8-0626-SM-48TYW 21.4
GTEX-ZZPU-0626-SM-5E43T 21.4
GTEX-ZVT4-1026-SM-57WC4 21.3
GTEX-TMMY-0726-SM-33HBE 21.2
GTEX-YFCO-1826-SM-4W1YH 21.2
GTEX-11WQK-2426-SM-5GU5C 21.1
GTEX-1314G-1226-SM-5BC6D 21.1
GTEX-13NZB-2126-SM-5MR4Y 21.1
GTEX-XUW1-2326-SM-4BOO5 21.1
GTEX-U3ZH-1426-SM-4DXSR 20.9
GTEX-WYBS-0926-SM-3NM94 20.9
GTEX-XBED-1626-SM-47JYN 20.9
GTEX-UTHO-1026-SM-3GAF7 20.8
GTEX-XQ8I-2426-SM-4WAXY 20.8
GTEX-ZUA1-1526-SM-59HLS 20.8
GTEX-QVJO-1826-SM-447C9 20.7
GTEX-WOFL-0826-SM-3MJG1 20.7
GTEX-12ZZX-1126-SM-5EGKB 20.6
GTEX-13NZ8-0126-SM-5IJCT 20.6
GTEX-11GS4-2126-SM-5A5KR 20.3
GTEX-13PVQ-1026-SM-5KM3M 20.3
GTEX-TML8-1226-SM-32QON 20.3
GTEX-11LCK-2426-SM-5HL5F 20.1
GTEX-WI4N-1426-SM-3LK7H 20.1
GTEX-Y111-2026-SM-4SOJA 20.1
GTEX-ZXES-0826-SM-5E43C 20.1
GTEX-ZYW4-0826-SM-5GIDG 20.1
GTEX-13OW5-2226-SM-5L3HC 20.0
GTEX-13QIC-2326-SM-5LU5N 20.0
GTEX-ZF29-1926-SM-5S2P1 20.0
GTEX-11NSD-0926-SM-5N9DR 19.9
GTEX-111YS-1926-SM-5GICC 19.8
GTEX-ZF2S-2026-SM-5E461 19.8
GTEX-11NV4-2026-SM-5N9DG 19.7
GTEX-ZEX8-2226-SM-57WC6 19.7
GTEX-1192X-2326-SM-5987X 19.6
GTEX-Y8LW-1626-SM-5IFHX 19.6
GTEX-ZC5H-2626-SM-5J2MG 19.6
GTEX-117XS-1926-SM-5GICO 19.4
GTEX-U412-1826-SM-4DXTJ 19.4
GTEX-WYVS-1726-SM-3NMAY 19.4
GTEX-ZVE2-1226-SM-5NQ8R 19.3
GTEX-U3ZN-1926-SM-4DXSG 19.1
GTEX-13N1W-0626-SM-5MR4U 19.0
GTEX-WYJK-1326-SM-3NB2T 18.9
GTEX-T2IS-1526-SM-32QPR 18.8
GTEX-S4P3-1326-SM-4AD6V 18.5
GTEX-S7SE-0826-SM-4AT4D 18.5
GTEX-1269C-2426-SM-5FQSN 18.3
GTEX-UPK5-2326-SM-3P5Z8 18.3
GTEX-XUJ4-1926-SM-4BOOV 18.3
GTEX-11EM3-1326-SM-5N9C6 18.2
GTEX-YFC4-1426-SM-5IFJG 18.1
GTEX-ZWKS-2826-SM-5NQ74 18.0
GTEX-13PL6-2926-SM-5L3I2 17.9
GTEX-131XW-0726-SM-5EGK3 17.8
GTEX-Q2AG-0326-SM-48U1O 17.8
GTEX-11GSO-1926-SM-5A5K3 17.6
GTEX-13FTY-2226-SM-5J1ND 17.6
GTEX-T5JC-2126-SM-32PMO 17.5
GTEX-UJHI-1426-SM-3DB9C 17.5
GTEX-11EI6-0626-SM-5985T 17.4
GTEX-R55F-1726-SM-2TF4R 17.4
GTEX-X4EP-2926-SM-3P5YQ 17.3
GTEX-11OF3-1926-SM-59889 17.1
GTEX-139T8-0826-SM-5L3DE 17.1
GTEX-X15G-1626-SM-3NMB3 17.1
GTEX-12WSB-0626-SM-59HJO 17.0
GTEX-13O3Q-2226-SM-5KM4O 16.5
GTEX-RWS6-1926-SM-47JXY 16.5
GTEX-13O3P-0826-SM-5L3DH 16.4
GTEX-R3RS-0626-SM-48FE1 16.2
GTEX-ZF3C-2326-SM-5S2MZ 16.1
GTEX-RU72-0626-SM-46MUI 14.9
GTEX-T2YK-2226-SM-32QPT 14.4
GTEX-132Q8-1426-SM-5EGK7 14.3
GTEX-XMD2-0926-SM-4WWEF 14.2
GTEX-14753-2426-SM-5LU8U 13.8
GTEX-XMD1-0826-SM-4AT52 13.8
GTEX-13W46-0826-SM-5LU3H 12.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

43.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 43.5
FF:10080-102A8 77 years, female 43.5

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