Tissue expression of FH - Staining in cerebral cortex - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

FH

premium

TISSUE

premium

CELL

CANCER

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation

Dictionary
	Cerebral cortex


Tissue proteome
	Brain
	Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	52.9	TPM
GTEx:	25.6	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	Low
Neuronal cells:	Low
Neuropil:	Medium

Antibody staining	Antibody HPA025770		Antibody HPA025948		Antibody HPA027341		Antibody CAB017785
Endothelial cells	Low		Not detected		Medium		Medium
Glial cells	Not detected		Not detected		Medium		Not detected
Neuronal cells	Low		Medium		Medium		Medium
Neuropil	Medium		Low		Medium		Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	52.9

N/A

Male, age 5

Sample 1
TPM: 48.4

overview

Female, age 40

Sample 2
TPM: 51.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

overview

Male, age 70

Sample 3
TPM: 59.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	25.6

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 23.7

Samples: 114

Max RPKM: 32.9
Min RPKM: 12.2
Std RPKM: 4.1
Median RPKM: 24

GTEX-QMR6-1426-SM-32PLA

32.9

GTEX-13FHO-3026-SM-5J1O9

32.8

GTEX-XLM4-3026-SM-4AT6L

31.2

GTEX-PVOW-2526-SM-2XCF7

31.1

GTEX-14BMV-3026-SM-5S2PQ

30.6

GTEX-11DXY-3226-SM-5GIDE

30.3

GTEX-132Q8-3026-SM-5PNVG

30.3

GTEX-139T8-1026-SM-5J2MC

29.8

Show all

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 27.6

Samples: 108

Max RPKM: 40.3
Min RPKM: 7.3
Std RPKM: 5.9
Median RPKM: 28.1

GTEX-QVUS-0011-R10A-SM-3GIK3

40.3

GTEX-P44H-0011-R10A-SM-2XCEK

38.8

GTEX-XLM4-0011-R10A-SM-4AT5P

38.3

GTEX-12ZZY-0011-R10b-SM-5HL7W

37.5

GTEX-13RTJ-0011-R10b-SM-5O9CW

37.1

GTEX-145MG-0011-R10a-SM-5PNWG

36.2

GTEX-13O3O-0011-R10a-SM-5LUA9

36.1

GTEX-13FHO-0011-R10b-SM-5J2MM

36.0

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.