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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:19.2RPKM
FANTOM5:102.8Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Glial cells

Not detected   Not detected   Medium   Low  

Neuronal cells

Medium   Low   Medium   Low  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

19.2

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 19.2
Samples: 94

Max RPKM: 37.1
Min RPKM: 4.7
Std RPKM: 6.9
Median RPKM: 19.4
GTEX-131XH-0011-R1a-SM-5DUWA 37.1
GTEX-T6MN-0011-R1A-SM-32QOY 34.2
GTEX-12WSF-0011-R1a-SM-5DUVI 32.4
GTEX-T5JC-0011-R1A-SM-32PM6 31.2
GTEX-12WSE-0011-R1b-SM-5GU4V 30.6
GTEX-X585-0011-R1B-SM-46MVE 30.3
GTEX-N7MS-0011-R1a-SM-2HMJG 28.8
GTEX-13FXS-0011-R1a-SM-5K7U6 28.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 28.4
GTEX-13JUV-0011-R1a-SM-5LZY4 27.8
GTEX-13O3O-0011-R1b-SM-5KM2K 27.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 26.8
GTEX-P44H-0011-R1A-SM-3NM8J 26.5
GTEX-YFC4-0011-R1a-SM-4V6EH 26.5
GTEX-PVOW-0011-R1A-SM-32PL6 26.4
GTEX-13G51-0011-R1a-SM-5LZYR 26.1
GTEX-144GL-0011-R1a-SM-5PNZ5 26.1
GTEX-139TT-0011-R1a-SM-5LZVD 26.0
GTEX-S7SE-0011-R1A-SM-2XCDE 25.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 25.1
GTEX-QVUS-0011-R1A-SM-3GAD2 24.4
GTEX-XOTO-0011-R1B-SM-4B65C 24.0
GTEX-1313W-0011-R1b-SM-5EQ4A 24.0
GTEX-TSE9-0011-R1A-SM-3DB7E 24.0
GTEX-13FHO-0011-R1b-SM-5KLZG 23.6
GTEX-N7MT-0011-R1a-SM-5SI7S 23.2
GTEX-QDT8-0011-R1A-SM-32PKS 23.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 22.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 22.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 22.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 22.4
GTEX-NPJ7-0011-R1a-SM-3GACT 22.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 22.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 22.2
GTEX-R55E-0011-R1A-SM-2TC6N 22.2
GTEX-WWYW-0011-R1A-SM-3TW8G 22.1
GTEX-13N1W-0011-R1b-SM-5MR4T 21.9
GTEX-13N2G-0011-R1b-SM-5MR3G 21.7
GTEX-1399T-0011-R1b-SM-5DUWN 21.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 21.6
GTEX-RNOR-0011-R1A-SM-5SI8F 21.5
GTEX-WZTO-0011-R1B-SM-3NMAR 21.3
GTEX-145MH-0011-R1b-SM-5PNWY 20.9
GTEX-13X6I-0011-R1b-SM-5PNZC 20.7
GTEX-QVJO-0011-R1A-SM-2S1QI 20.6
GTEX-13FLW-0011-R1b-SM-5LZX2 19.7
GTEX-WL46-0011-R1A-SM-3LK6M 19.5
GTEX-13NYB-0011-R1b-SM-5KM4F 19.4
GTEX-UTHO-0011-R1A-SM-3GIJO 19.0
GTEX-WVLH-0011-R1A-SM-4MVOK 18.9
GTEX-12WSH-0011-R1a-SM-5GU5V 18.8
GTEX-14ASI-0011-R1b-SM-5S2TY 18.7
GTEX-131YS-0011-R1a-SM-5DUXC 18.6
GTEX-QMR6-0011-R1A-SM-32PKW 18.4
GTEX-13OVL-0011-R1a-SM-5L3H5 17.7
GTEX-11ONC-0011-R1a-SM-57WD4 17.6
GTEX-13OW7-0011-R1b-SM-5L3HF 17.6
GTEX-11GSO-0011-R1b-SM-57WD3 17.6
GTEX-13NYS-0011-R1b-SM-5MR55 17.4
GTEX-11UD1-0011-R1b-SM-5BC7D 17.3
GTEX-PWO3-0011-R1A-SM-2I5EW 17.0
GTEX-145LS-0011-R1b-SM-5PNUP 16.8
GTEX-12WSD-0011-R1b-SM-5LZVY 16.5
GTEX-X4XX-0011-R1B-SM-3P622 15.4
GTEX-13S7M-0011-R1b-SM-5PNZE 15.1
GTEX-13OW5-0011-R1b-SM-5L3GE 15.1
GTEX-13OW8-0011-R1a-SM-5L3HI 15.0
GTEX-12WSM-0011-R1a-SM-5LZW6 15.0
GTEX-XMD1-0011-R1A-SM-4AT4C 14.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 14.1
GTEX-13JVG-0011-R1a-SM-5KM32 14.1
GTEX-13112-0011-R1b-SM-5HL7K 13.9
GTEX-132Q8-0011-R1a-SM-5EGLK 13.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 13.3
GTEX-145LU-0011-R1a-SM-5Q5CE 12.9
GTEX-1212Z-0011-R1b-SM-5BC72 12.7
GTEX-13SLW-0011-R1a-SM-5S2W7 12.4
GTEX-NPJ8-0011-R1a-SM-33HCB 11.9
GTEX-13QJC-0011-R1b-SM-5S2UU 11.6
GTEX-12WSB-0011-R1b-SM-5P9EY 11.5
GTEX-11ZTS-0011-R1a-SM-5BC71 11.5
GTEX-YJ89-0011-R1a-SM-4RGLS 10.2
GTEX-13FHP-0011-R1b-SM-5K7XL 10.1
GTEX-139T8-0011-R1a-SM-5HL75 9.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 9.4
GTEX-13NZA-0011-R1b-SM-5LUAF 9.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 9.0
GTEX-13PDP-0011-R1a-SM-5PNX5 8.3
GTEX-ZF28-0011-R1a-SM-4WWD1 7.9
GTEX-NL3H-0011-R1a-SM-48TDJ 7.3
GTEX-13CF2-0011-R1a-SM-5LZY1 6.9
GTEX-144GO-0011-R1a-SM-5PNWO 6.2
GTEX-13FTY-0011-R1a-SM-5LZXE 5.5
GTEX-ZE7O-0011-R1a-SM-57WDM 4.7
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

102.8

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 102.8
FF:10169-103B7 60 years, female 153.3
FF:10153-102I9 76 years, female 88.5
FF:10374-105G5 89 years, female 66.7

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