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TISSUE ATLAS PRIMARY DATA LIVER
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:141.9TPM
GTEx:64.1RPKM
FANTOM5:285.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:Medium
 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Bile duct cells

Not detected   Not detected   Low   Not detected  

Hepatocytes

Medium   Medium   High   High  
       
       
       

LIVER - HPA RNA-seq

Average TPM

141.9

N/A Female, age 60
Sample 1
TPM: 103.6
overview Male, age 54
Sample 2
TPM: 105.6
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 115.3
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 155.9
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 106.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 179.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 120.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 125.9
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 133.8
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 272.0
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

64.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 64.1
Samples: 119

Max RPKM: 108
Min RPKM: 10.6
Std RPKM: 17.7
Median RPKM: 63.9
GTEX-13N11-0926-SM-5IJG2 108.0
GTEX-QESD-2026-SM-447BI 107.7
GTEX-R53T-0326-SM-48FEC 100.8
GTEX-14E1K-0326-SM-5S2PE 100.1
GTEX-Y5LM-0426-SM-4VBRO 99.6
GTEX-QEG4-1826-SM-4R1JN 98.2
GTEX-13SLX-1226-SM-5S2Q6 95.5
GTEX-YB5E-0326-SM-5IFHU 93.6
GTEX-WFON-1726-SM-4LVMQ 92.3
GTEX-UPIC-0926-SM-4IHLV 91.2
GTEX-145MF-0826-SM-5QGQA 89.9
GTEX-14AS3-0126-SM-5Q5F4 89.7
GTEX-U3ZN-0226-SM-3DB8D 86.3
GTEX-OOBJ-0826-SM-3NB2K 83.6
GTEX-S4Z8-0526-SM-4AD4T 83.2
GTEX-P78B-1326-SM-3P611 82.8
GTEX-13113-1326-SM-5GCOI 82.5
GTEX-ZAB5-0426-SM-5CVMI 81.9
GTEX-13FTW-1126-SM-5J2NV 81.3
GTEX-131YS-1626-SM-5HL6C 81.1
GTEX-Z9EW-0426-SM-5CVM9 80.2
GTEX-12WSL-0226-SM-5CVMJ 79.3
GTEX-12WSD-1426-SM-5GCN9 78.8
GTEX-ZF29-2026-SM-4WWB7 78.6
GTEX-S32W-1926-SM-4AD63 78.4
GTEX-11EQ9-0526-SM-5A5JZ 78.3
GTEX-1399R-1226-SM-5P9GF 77.7
GTEX-13OW6-2626-SM-5IFF2 76.5
GTEX-139TS-1426-SM-5IFJD 75.4
GTEX-14753-1626-SM-5NQ9L 75.1
GTEX-1399T-0826-SM-5IFES 74.9
GTEX-ZPU1-0826-SM-57WG2 74.2
GTEX-QV44-0326-SM-4R1KD 74.1
GTEX-11DXZ-0126-SM-5EGGY 73.9
GTEX-132NY-0926-SM-5P9G3 73.7
GTEX-12WSG-0626-SM-5FQTQ 73.1
GTEX-13FTZ-0726-SM-5IFFY 73.1
GTEX-ZZPU-0426-SM-5GZYH 72.8
GTEX-RM2N-1926-SM-48FCU 72.4
GTEX-WQUQ-1926-SM-4OOSA 72.4
GTEX-RU72-1426-SM-46MUF 71.9
GTEX-XOTO-0826-SM-4B65O 71.5
GTEX-ZYT6-0626-SM-5E45V 71.3
GTEX-14DAQ-1726-SM-5S2R2 70.9
GTEX-UPK5-1426-SM-4JBHH 69.7
GTEX-QEL4-1226-SM-447A4 69.2
GTEX-139YR-0226-SM-5IFEM 67.5
GTEX-11OF3-0726-SM-5BC4Z 67.4
GTEX-13FLV-0326-SM-5N9DJ 67.4
GTEX-ZF2S-3026-SM-4WWCH 67.4
GTEX-145MO-2326-SM-5NQ9K 66.9
GTEX-RTLS-1326-SM-46MUN 66.8
GTEX-12KS4-1326-SM-5LUB3 66.6
GTEX-VUSG-0126-SM-4KL1X 65.7
GTEX-13NYB-1026-SM-5IFH3 65.1
GTEX-RWSA-1426-SM-47JXA 64.7
GTEX-TKQ2-1726-SM-4DXUP 64.4
GTEX-ZVP2-0626-SM-51MSO 64.4
GTEX-X4EO-1126-SM-4QARQ 64.2
GTEX-146FH-1526-SM-5NQBU 63.9
GTEX-13PVR-0126-SM-5S2PY 62.8
GTEX-YECK-1926-SM-4W21H 62.8
GTEX-13NZ9-1326-SM-5MR3V 62.7
GTEX-X3Y1-2726-SM-4PQZH 62.3
GTEX-139TU-0826-SM-5IJFG 61.8
GTEX-ZVT3-1626-SM-5GU66 60.6
GTEX-Q734-0326-SM-48U15 60.5
GTEX-PX3G-0826-SM-48TZS 60.1
GTEX-13112-1426-SM-5EGH8 60.0
GTEX-UTHO-2426-SM-4JBHD 59.3
GTEX-1497J-0726-SM-5Q5D1 59.2
GTEX-147F4-1426-SM-5LUA8 59.1
GTEX-WYVS-1926-SM-4PQZ2 58.8
GTEX-131XH-0626-SM-5LZWH 58.1
GTEX-YFC4-1526-SM-5IFJS 57.0
GTEX-12WSM-0726-SM-5GCOW 56.5
GTEX-11NV4-1326-SM-5HL6V 55.1
GTEX-ZTPG-1426-SM-51MT3 55.0
GTEX-Y5V5-0926-SM-4VBPZ 54.6
GTEX-1212Z-0226-SM-59HLF 54.4
GTEX-ZVT4-0626-SM-5E45T 54.4
GTEX-145LU-1326-SM-5LU9N 54.0
GTEX-13QJC-0726-SM-5RQJK 53.6
GTEX-T6MN-1226-SM-3NMA5 53.4
GTEX-13VXU-0926-SM-5IFFH 52.7
GTEX-12696-0826-SM-5EGGE 52.2
GTEX-Q2AG-1126-SM-48U1P 52.1
GTEX-REY6-1226-SM-48FDR 52.1
GTEX-147JS-1126-SM-5RQIW 52.0
GTEX-SJXC-1226-SM-4DM78 51.3
GTEX-QDVN-0826-SM-48TZ2 49.8
GTEX-S33H-1626-SM-4AD68 49.8
GTEX-1269C-0626-SM-5FQSS 49.7
GTEX-YEC4-0826-SM-5P9FV 49.4
GTEX-12WSI-0226-SM-5GCNA 48.8
GTEX-144GM-1326-SM-5LU5E 48.7
GTEX-13N2G-0926-SM-5IFGJ 47.8
GTEX-11WQC-0726-SM-5EQMR 47.6
GTEX-13O3O-1826-SM-5IFGW 47.1
GTEX-ZYY3-0626-SM-5NQ6W 47.1
GTEX-14A5I-1726-SM-5QGQ5 47.0
GTEX-X4EP-1026-SM-4QAS5 46.8
GTEX-RN64-1826-SM-48FDV 46.2
GTEX-X261-1726-SM-4PQYT 45.7
GTEX-14C38-1526-SM-5RQJ7 44.0
GTEX-11ZTS-1426-SM-5EQMM 43.3
GTEX-11ZVC-0726-SM-5FQT9 43.2
GTEX-ZAB4-0826-SM-5LU9D 43.2
GTEX-RNOR-1426-SM-48FDJ 43.0
GTEX-11DXY-0526-SM-5EGGQ 42.3
GTEX-11NUK-1226-SM-5P9GM 41.8
GTEX-131XE-0326-SM-5LZVO 40.6
GTEX-WZTO-0626-SM-4PQYY 40.4
GTEX-XBEC-1526-SM-4AT68 40.4
GTEX-11ZUS-2526-SM-59872 36.5
GTEX-13NZB-0626-SM-5IFH6 34.7
GTEX-X4XY-1626-SM-46MVN 29.7
GTEX-11GSP-0626-SM-5986T 20.8
GTEX-12ZZZ-1326-SM-59HKW 10.6
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

285.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 285.5
FF:10018-101C9 64,69,70 years, mixed 285.5

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