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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:66.3TPM
GTEx:32.5RPKM
FANTOM5:120.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Glandular cells

High   Medium   High   High  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

66.3

overview Male, age 65
Sample 1
TPM: 63.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 68.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 60.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 72.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

32.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 32.5
Samples: 88

Max RPKM: 62.7
Min RPKM: 13.9
Std RPKM: 9.1
Median RPKM: 31.2
GTEX-XGQ4-1326-SM-4GIDU 62.7
GTEX-ZYFG-2026-SM-5E43Y 60.7
GTEX-YB5E-1526-SM-5IFIE 52.0
GTEX-131XF-1326-SM-5GCMQ 51.1
GTEX-11EQ9-1326-SM-5985X 48.8
GTEX-XUZC-1426-SM-4BRV3 47.6
GTEX-ZLV1-1126-SM-4WWBW 46.5
GTEX-13113-1226-SM-5EGHT 46.3
GTEX-Y5LM-1626-SM-4VDTB 45.5
GTEX-ZYWO-1526-SM-5SIAL 45.2
GTEX-ZXES-1526-SM-5NQ95 45.1
GTEX-WFG8-1626-SM-4LVMB 44.8
GTEX-133LE-1426-SM-5IFH1 44.5
GTEX-145LT-1026-SM-5LU9O 43.6
GTEX-139YR-2226-SM-5IFFW 42.2
GTEX-ZZ64-0526-SM-5GZXM 40.6
GTEX-ZPCL-1726-SM-57WEO 39.2
GTEX-1122O-1326-SM-5H11F 38.7
GTEX-13RTK-0826-SM-5Q5C6 38.2
GTEX-13FTW-2026-SM-5IJE2 37.6
GTEX-ZVZP-1826-SM-5GZXB 37.5
GTEX-14DAR-1426-SM-5RQIR 36.5
GTEX-Y3IK-1726-SM-4YCCR 36.4
GTEX-11P82-0826-SM-5P9GU 35.5
GTEX-YEC4-1726-SM-4W21E 35.3
GTEX-13PL7-2626-SM-5IFH4 34.7
GTEX-ZEX8-1826-SM-57WBH 34.6
GTEX-Y9LG-1626-SM-5IFHM 34.6
GTEX-ZP4G-1626-SM-57WGD 33.7
GTEX-11DXX-1626-SM-5H11H 33.4
GTEX-13D11-0726-SM-5LZZB 33.1
GTEX-ZTX8-0526-SM-59HLD 33.1
GTEX-X5EB-1626-SM-4E3IV 32.8
GTEX-ZTPG-2626-SM-57WFX 32.7
GTEX-11I78-1126-SM-5A5K5 32.5
GTEX-ZVT2-2126-SM-5NQ93 32.5
GTEX-117YX-0326-SM-5GICL 32.5
GTEX-ZA64-1226-SM-5HL7B 32.0
GTEX-ZF2S-1726-SM-57WFT 31.9
GTEX-1399R-2026-SM-5K7WN 31.5
GTEX-WQUQ-2426-SM-4MVNW 31.4
GTEX-ZTSS-0926-SM-59865 31.2
GTEX-Y114-1426-SM-4TT6W 31.2
GTEX-11DXZ-1326-SM-5H11X 31.2
GTEX-ZPIC-2326-SM-57WDW 31.2
GTEX-XBED-1426-SM-4AT4G 31.1
GTEX-111YS-1426-SM-5GID8 30.8
GTEX-WEY5-1526-SM-4LMJF 30.2
GTEX-111CU-1326-SM-5NQ8L 30.1
GTEX-12WSK-1526-SM-5CVNO 29.7
GTEX-13111-1426-SM-5DUW3 29.5
GTEX-WFG7-1726-SM-4LVME 29.4
GTEX-ZQUD-0926-SM-57WE3 29.4
GTEX-13O61-1326-SM-5KM31 29.3
GTEX-YF7O-1826-SM-5IFIU 29.2
GTEX-XMK1-1826-SM-4B66F 29.2
GTEX-11P7K-1626-SM-5GU63 29.1
GTEX-139T6-1026-SM-5IJGC 28.9
GTEX-11NSD-1726-SM-5N9C3 28.6
GTEX-131XG-1726-SM-5LZUR 28.3
GTEX-XXEK-1026-SM-4BRUW 28.2
GTEX-ZQG8-2526-SM-57WEQ 28.0
GTEX-WFJO-0926-SM-4LVM2 27.9
GTEX-14E6E-1626-SM-5RQI7 27.5
GTEX-Z9EW-0926-SM-5CVMM 27.4
GTEX-VJYA-0926-SM-4KL1N 26.8
GTEX-ZLFU-1526-SM-4WWBT 26.8
GTEX-WH7G-1626-SM-4LVMY 26.3
GTEX-ZVP2-1726-SM-5GU5P 26.1
GTEX-X15G-1426-SM-4PQZK 25.4
GTEX-UPK5-2026-SM-4JBIM 25.0
GTEX-XAJ8-0526-SM-47JYK 24.8
GTEX-1399U-2126-SM-5IFEZ 24.8
GTEX-1399S-2026-SM-5KM4B 24.4
GTEX-13O21-1026-SM-5IJDU 24.3
GTEX-11VI4-1626-SM-5EQKO 23.8
GTEX-13CF3-1226-SM-5LZXN 23.1
GTEX-145ME-0926-SM-5O9AR 23.0
GTEX-12BJ1-1926-SM-5HL9Z 22.6
GTEX-13FH7-1226-SM-5IJFK 22.4
GTEX-13QBU-1926-SM-5IJEW 22.1
GTEX-WRHK-1026-SM-4MVOD 21.7
GTEX-1192X-2526-SM-59868 21.5
GTEX-11XUK-1426-SM-5EQMG 21.3
GTEX-13OVI-1926-SM-5IJCG 21.3
GTEX-148VJ-2226-SM-5NQ9M 16.7
GTEX-ZC5H-2326-SM-4WAYT 16.2
GTEX-VUSG-1726-SM-4KKZL 13.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

120.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 120.3
FF:10024-101D6 15,40,85 years, mixed 120.3

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