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TISSUE ATLAS PRIMARY DATA SPLEEN
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.6TPM
GTEx:22.1RPKM
FANTOM5:46.2Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Cells in red pulp

Low   Not detected   Medium   Medium  

Cells in white pulp

Medium   Not detected   Medium   Medium  
       
       
       

SPLEEN - HPA RNA-seq

Average TPM

33.6

overview Female, age 60
Sample 1
TPM: 29.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 30.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 31.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 30.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 46.2
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

22.1

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 22.1
Samples: 104

Max RPKM: 30.6
Min RPKM: 12.4
Std RPKM: 3.3
Median RPKM: 22.1
GTEX-ZP4G-0326-SM-4YCEF 30.6
GTEX-13N11-0126-SM-5KM2Z 29.2
GTEX-O5YT-0926-SM-48TDG 27.8
GTEX-PX3G-0926-SM-48U12 27.6
GTEX-QMRM-0226-SM-4R1K7 27.6
GTEX-Y5LM-0326-SM-4VBRN 27.5
GTEX-R55G-0226-SM-48FEI 27.3
GTEX-145MN-0126-SM-5RQHY 27.0
GTEX-146FQ-0626-SM-5LU9U 27.0
GTEX-13FH7-1326-SM-5IFG8 26.7
GTEX-11VI4-0126-SM-5GU6Z 26.4
GTEX-132QS-0226-SM-5IFFZ 26.4
GTEX-Y3IK-0126-SM-4WWE9 26.4
GTEX-131XG-0426-SM-5IFGD 26.2
GTEX-13U4I-1626-SM-5IFFR 26.2
GTEX-YB5E-0426-SM-5IFHR 26.2
GTEX-XV7Q-0126-SM-4BRVK 26.1
GTEX-12WSK-0126-SM-5GCO7 25.8
GTEX-ZLFU-0526-SM-4WWBN 25.8
GTEX-11P81-1326-SM-5GU5S 25.5
GTEX-13VXT-1326-SM-5LU3Y 25.2
GTEX-U3ZH-0126-SM-4DXUK 25.2
GTEX-ZYWO-0226-SM-5GZX3 24.7
GTEX-1399S-0226-SM-5IFFG 24.6
GTEX-146FR-1926-SM-5NQA6 24.5
GTEX-VJYA-0126-SM-4KL1P 24.4
GTEX-XPVG-0626-SM-4B65B 24.4
GTEX-XMK1-0126-SM-4B65F 24.2
GTEX-139T6-0226-SM-5IFGZ 24.0
GTEX-14DAR-0326-SM-5S2PS 24.0
GTEX-ZPU1-1026-SM-4YCEQ 23.9
GTEX-U4B1-0526-SM-4DXTK 23.8
GTEX-12WSJ-0526-SM-5GCOZ 23.6
GTEX-12WSN-0126-SM-5DUX5 23.6
GTEX-ZAB5-0526-SM-5CVMU 23.5
GTEX-POMQ-0126-SM-48TD6 23.3
GTEX-QV31-0126-SM-447BP 23.3
GTEX-11P7K-0426-SM-5BC5H 23.2
GTEX-Y8LW-0126-SM-4VBS1 23.2
GTEX-P4PP-0926-SM-48TBZ 23.1
GTEX-11XUK-0426-SM-5EQML 23.0
GTEX-117YX-2126-SM-5GIEL 22.9
GTEX-13CF3-0226-SM-5J1NW 22.9
GTEX-11NSD-0426-SM-5N9CR 22.8
GTEX-ZVZP-0726-SM-59HKA 22.8
GTEX-PW2O-0126-SM-48TC8 22.6
GTEX-ZZPU-0126-SM-5E446 22.6
GTEX-OOBJ-0926-SM-48TDO 22.5
GTEX-13X6H-0726-SM-5Q5BX 22.4
GTEX-QCQG-0226-SM-48U28 22.3
GTEX-139YR-0426-SM-5IFFV 22.2
GTEX-11EQ9-0426-SM-5A5JY 22.1
GTEX-13111-0126-SM-5EGHO 22.1
GTEX-Y114-0726-SM-4TT6U 22.1
GTEX-QLQW-0126-SM-447BK 21.8
GTEX-12WSG-0926-SM-5EGIH 21.7
GTEX-147F3-0126-SM-5NQBJ 21.7
GTEX-1122O-0526-SM-5N9DM 21.6
GTEX-131XE-1126-SM-5EGHW 21.6
GTEX-YB5K-1926-SM-4VDT4 21.6
GTEX-XAJ8-0126-SM-47JYG 21.4
GTEX-U3ZN-0126-SM-4DXUM 21.3
GTEX-P4QS-0926-SM-48TBS 21.2
GTEX-T5JW-0126-SM-4DM6K 21.2
GTEX-ZLWG-0426-SM-4WWFA 21.2
GTEX-144GN-2126-SM-5O99D 21.1
GTEX-ZYFG-0726-SM-5GIDX 21.1
GTEX-1399R-0226-SM-5IJGG 20.9
GTEX-PLZ6-0126-SM-48TC6 20.9
GTEX-YFCO-0926-SM-5LUA5 20.9
GTEX-UJHI-0126-SM-4IHLP 20.7
GTEX-XUJ4-0226-SM-4BOP8 20.7
GTEX-X4LF-0226-SM-4QAS8 20.5
GTEX-ZV6S-0826-SM-5NQ6Z 20.3
GTEX-ZDTT-1026-SM-5KM19 20.1
GTEX-QDVN-0526-SM-48TZ4 19.9
GTEX-WHWD-0126-SM-4OORS 19.9
GTEX-13PVR-0326-SM-5RQJY 19.7
GTEX-OIZH-0926-SM-48TBR 19.7
GTEX-WFON-0126-SM-4LVM9 19.6
GTEX-1211K-0426-SM-5FQTP 19.3
GTEX-W5WG-0626-SM-4SOID 19.3
GTEX-QV44-0126-SM-4R1KH 19.2
GTEX-Z9EW-0726-SM-5HL9H 19.2
GTEX-11DXX-0726-SM-5H12X 19.0
GTEX-RUSQ-0126-SM-47JWV 18.9
GTEX-13PL7-1126-SM-5MR5O 18.8
GTEX-UPK5-1626-SM-4JBHI 18.8
GTEX-XGQ4-0126-SM-4AT4H 18.7
GTEX-YEC4-0126-SM-4W21T 18.6
GTEX-11LCK-0126-SM-5A5M5 18.0
GTEX-Y3I4-0126-SM-4TT26 18.0
GTEX-12BJ1-0726-SM-5EGGF 17.7
GTEX-XXEK-0126-SM-4BRVU 17.6
GTEX-Q734-0226-SM-48U1A 17.5
GTEX-S4Z8-0226-SM-4AD5K 17.2
GTEX-XQ8I-1726-SM-4BOQB 17.0
GTEX-ZVP2-0526-SM-51MSC 17.0
GTEX-S3XE-0626-SM-4AD6B 16.5
GTEX-Q2AH-0226-SM-48U1I 16.3
GTEX-X3Y1-0126-SM-4PQZA 16.2
GTEX-14E6E-1226-SM-5S2R5 15.6
GTEX-13S86-0126-SM-5S2PI 14.7
GTEX-X585-1826-SM-4QAS3 12.4
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

46.2

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 46.2
FF:10025-101D7 39,50,70 years, male 46.2

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