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AAAS

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.7TPM
GTEx:17.9RPKM
FANTOM5:23.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA040086

  

Adipocytes

 Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA040086

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

11.7
N/A Female, age 80
Sample 1
TPM: 10.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 6.9
N/A Female, age 57
Sample 3
TPM: 4.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 20.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 16.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

17.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 17.9
Samples: 350

Max RPKM: 30.9
Min RPKM: 5.7
Std RPKM: 4
Median RPKM: 17.7
GTEX-X638-0226-SM-47JZ9 30.9
GTEX-YJ8O-2426-SM-5HL7S 30.0
GTEX-13N2G-2726-SM-5J1MG 29.0
GTEX-XMD2-0226-SM-4WWEE 28.1
GTEX-Y5V5-2426-SM-5IFJA 28.0
GTEX-ZUA1-0226-SM-5NQ9Q 27.5
GTEX-XMK1-2226-SM-4B673 27.2
GTEX-13O3Q-2326-SM-5KM3G 27.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 17.9
Samples: 227

Max RPKM: 37.9
Min RPKM: 6
Std RPKM: 5.9
Median RPKM: 17.2
GTEX-WWTW-1326-SM-4MVNT 37.9
GTEX-14DAQ-2526-SM-5RQIO 32.2
GTEX-12ZZW-2326-SM-5DUW2 31.3
GTEX-131YS-1726-SM-5HL7G 31.3
GTEX-13O3Q-1126-SM-5K7YK 31.2
GTEX-13NZ9-2026-SM-5KM1U 31.1
GTEX-XOT4-0826-SM-4B66Y 30.5
GTEX-XBEC-1826-SM-4QASN 29.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

23.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 23.7
FF:10010-101C1 65,65,76 years, mixed 23.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.