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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.7TPM
GTEx:19.9RPKM
FANTOM5:37.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA040086

 

Glandular cells

Not detected  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

13.7

overview Male, age 65
Sample 1
TPM: 12.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 15.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 16.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 10.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

19.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 19.9
Samples: 88

Max RPKM: 30.6
Min RPKM: 12.2
Std RPKM: 4.6
Median RPKM: 19
GTEX-1192X-2526-SM-59868 30.6
GTEX-11NSD-1726-SM-5N9C3 30.0
GTEX-ZC5H-2326-SM-4WAYT 29.7
GTEX-WRHK-1026-SM-4MVOD 29.0
GTEX-X15G-1426-SM-4PQZK 29.0
GTEX-UPK5-2026-SM-4JBIM 28.6
GTEX-VUSG-1726-SM-4KKZL 27.9
GTEX-WFJO-0926-SM-4LVM2 27.9
GTEX-14E6E-1626-SM-5RQI7 27.4
GTEX-WQUQ-2426-SM-4MVNW 26.9
GTEX-WH7G-1626-SM-4LVMY 26.5
GTEX-XMK1-1826-SM-4B66F 26.3
GTEX-11XUK-1426-SM-5EQMG 26.1
GTEX-Z9EW-0926-SM-5CVMM 25.9
GTEX-13111-1426-SM-5DUW3 24.7
GTEX-117YX-0326-SM-5GICL 24.2
GTEX-ZQG8-2526-SM-57WEQ 24.0
GTEX-131XG-1726-SM-5LZUR 24.0
GTEX-ZEX8-1826-SM-57WBH 23.6
GTEX-133LE-1426-SM-5IFH1 23.6
GTEX-Y5LM-1626-SM-4VDTB 23.3
GTEX-ZF2S-1726-SM-57WFT 23.0
GTEX-1399R-2026-SM-5K7WN 22.7
GTEX-11VI4-1626-SM-5EQKO 22.7
GTEX-Y3IK-1726-SM-4YCCR 22.3
GTEX-13FH7-1226-SM-5IJFK 22.1
GTEX-ZTPG-2626-SM-57WFX 22.0
GTEX-XGQ4-1326-SM-4GIDU 21.9
GTEX-11P82-0826-SM-5P9GU 21.9
GTEX-VJYA-0926-SM-4KL1N 21.8
GTEX-13QBU-1926-SM-5IJEW 21.8
GTEX-XAJ8-0526-SM-47JYK 21.2
GTEX-ZP4G-1626-SM-57WGD 21.2
GTEX-WFG7-1726-SM-4LVME 20.8
GTEX-13OVI-1926-SM-5IJCG 20.5
GTEX-13RTK-0826-SM-5Q5C6 20.2
GTEX-ZYWO-1526-SM-5SIAL 20.2
GTEX-13CF3-1226-SM-5LZXN 19.8
GTEX-148VJ-2226-SM-5NQ9M 19.6
GTEX-13O61-1326-SM-5KM31 19.5
GTEX-12BJ1-1926-SM-5HL9Z 19.5
GTEX-1399U-2126-SM-5IFEZ 19.4
GTEX-WFG8-1626-SM-4LVMB 19.4
GTEX-12WSK-1526-SM-5CVNO 19.3
GTEX-13113-1226-SM-5EGHT 18.8
GTEX-131XF-1326-SM-5GCMQ 18.7
GTEX-145ME-0926-SM-5O9AR 18.6
GTEX-WEY5-1526-SM-4LMJF 18.3
GTEX-XBED-1426-SM-4AT4G 18.3
GTEX-13O21-1026-SM-5IJDU 18.1
GTEX-11DXZ-1326-SM-5H11X 18.1
GTEX-ZLFU-1526-SM-4WWBT 18.0
GTEX-ZQUD-0926-SM-57WE3 18.0
GTEX-XUZC-1426-SM-4BRV3 17.9
GTEX-11P7K-1626-SM-5GU63 17.6
GTEX-X5EB-1626-SM-4E3IV 17.5
GTEX-139YR-2226-SM-5IFFW 17.4
GTEX-YF7O-1826-SM-5IFIU 17.4
GTEX-11DXX-1626-SM-5H11H 17.3
GTEX-ZVP2-1726-SM-5GU5P 17.2
GTEX-11I78-1126-SM-5A5K5 17.0
GTEX-ZA64-1226-SM-5HL7B 17.0
GTEX-1399S-2026-SM-5KM4B 16.8
GTEX-11EQ9-1326-SM-5985X 16.5
GTEX-ZVT2-2126-SM-5NQ93 16.3
GTEX-YEC4-1726-SM-4W21E 16.3
GTEX-ZPIC-2326-SM-57WDW 16.2
GTEX-XXEK-1026-SM-4BRUW 16.2
GTEX-13PL7-2626-SM-5IFH4 16.1
GTEX-ZYFG-2026-SM-5E43Y 16.0
GTEX-YB5E-1526-SM-5IFIE 15.9
GTEX-139T6-1026-SM-5IJGC 15.8
GTEX-ZZ64-0526-SM-5GZXM 15.7
GTEX-Y9LG-1626-SM-5IFHM 15.5
GTEX-ZXES-1526-SM-5NQ95 15.5
GTEX-Y114-1426-SM-4TT6W 15.0
GTEX-145LT-1026-SM-5LU9O 15.0
GTEX-ZVZP-1826-SM-5GZXB 15.0
GTEX-ZLV1-1126-SM-4WWBW 14.8
GTEX-14DAR-1426-SM-5RQIR 14.6
GTEX-111CU-1326-SM-5NQ8L 14.6
GTEX-13FTW-2026-SM-5IJE2 14.2
GTEX-111YS-1426-SM-5GID8 14.0
GTEX-ZTSS-0926-SM-59865 13.3
GTEX-1122O-1326-SM-5H11F 13.2
GTEX-13D11-0726-SM-5LZZB 13.1
GTEX-ZPCL-1726-SM-57WEO 12.5
GTEX-ZTX8-0526-SM-59HLD 12.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

37.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 37.7
FF:10024-101D6 15,40,85 years, mixed 37.7

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