Tissue expression of NUBP2 - Summary - The Human Protein Atlas

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NUBP2

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	NUBP2
Gene description	Nucleotide binding protein 2
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	7
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous cytoplasmic expression.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data.
Reliability score	Uncertain based on 1 antibody. HPA041704
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

N/A

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	NUBP2 (HGNC Symbol)
Synonyms	CFD1
Description	Nucleotide binding protein 2 (HGNC Symbol)
Entrez gene summary	This gene encodes an adenosine triphosphate (ATP) and metal-binding protein that is required for the assembly of cyotosolic iron-sulfur proteins. The encoded protein functions in a heterotetramer with nucleotide-binding protein 1 (NUBP1). Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2013]
Chromosome	16
Cytoband	p13.3
Chromosome location (bp)	1782901 - 1789191
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000095906 (version 83.38)
Entrez gene	10101
UniProt	Q9Y5Y2 (UniProt - Evidence at protein level)
neXtProt	NX_Q9Y5Y2
Antibodypedia	NUBP2 antibodies

PROTEIN BROWSER

NUBP2-001	NUBP2-007	NUBP2-008	NUBP2-011	NUBP2-012	NUBP2-014	NUBP2-016

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
NUBP2-001 ENSP00000262302 ENST00000262302	Q9Y5Y2 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000166 [nucleotide binding] GO:0005515 [protein binding] GO:0005524 [ATP binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0016226 [iron-sulfur cluster assembly] GO:0031616 [spindle pole centrosome] GO:0044281 [small molecule metabolic process] GO:0046872 [metal ion binding] GO:0051539 [4 iron, 4 sulfur cluster binding] Show all	271 aa 28.8 kDa	No	0
NUBP2-007 ENSP00000454576 ENST00000563136	H3BMW1 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		139 aa 13.9 kDa	No	0
NUBP2-008 ENSP00000455896 ENST00000565987	H3BQR2 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005524 [ATP binding] Show all	211 aa 22.8 kDa	No	0
NUBP2-011 ENSP00000456199 ENST00000562263	H3BRE1 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005524 [ATP binding] Show all	144 aa 15.8 kDa	No	0
NUBP2-012 ENSP00000460079 ENST00000568706	B7Z6P0 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2; Nucleotide binding protein 2 (MinD homolog, E. coli), isoform CRA_d; cDNA FLJ57200, highly similar to Nucleotide-binding protein 2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		130 aa 13.8 kDa	No	0
NUBP2-014 ENSP00000454982 ENST00000568287	H3BNS4 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005524 [ATP binding] Show all	271 aa 29.6 kDa	No	0
NUBP2-016 ENSP00000454815 ENST00000565134	H3BNF0 [Direct mapping] Cytosolic Fe-S cluster assembly factor NUBP2 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005524 [ATP binding] Show all	251 aa 26.4 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.