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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:47.1TPM
GTEx:23.6RPKM
FANTOM5:294.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA045840

 

Antibody HPA054950

 

Antibody CAB037324

 

Glandular cells

Medium   Medium   Not detected  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

47.1

overview Male, age 65
Sample 1
TPM: 53.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 47.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 44.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 43.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

23.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 23.6
Samples: 88

Max RPKM: 63.5
Min RPKM: 1.6
Std RPKM: 14.3
Median RPKM: 21
GTEX-ZTSS-0926-SM-59865 63.5
GTEX-ZXES-1526-SM-5NQ95 52.6
GTEX-111YS-1426-SM-5GID8 52.1
GTEX-ZTX8-0526-SM-59HLD 50.7
GTEX-Y9LG-1626-SM-5IFHM 49.8
GTEX-YB5E-1526-SM-5IFIE 47.8
GTEX-14DAR-1426-SM-5RQIR 44.1
GTEX-11EQ9-1326-SM-5985X 43.3
GTEX-13113-1226-SM-5EGHT 42.6
GTEX-1122O-1326-SM-5H11F 42.2
GTEX-ZVZP-1826-SM-5GZXB 41.8
GTEX-13PL7-2626-SM-5IFH4 41.8
GTEX-11P7K-1626-SM-5GU63 40.9
GTEX-145LT-1026-SM-5LU9O 40.1
GTEX-1399S-2026-SM-5KM4B 39.9
GTEX-ZPCL-1726-SM-57WEO 39.2
GTEX-13D11-0726-SM-5LZZB 39.2
GTEX-ZLV1-1126-SM-4WWBW 38.5
GTEX-139YR-2226-SM-5IFFW 37.2
GTEX-XBED-1426-SM-4AT4G 37.0
GTEX-13FTW-2026-SM-5IJE2 35.0
GTEX-131XF-1326-SM-5GCMQ 34.8
GTEX-YF7O-1826-SM-5IFIU 34.5
GTEX-11I78-1126-SM-5A5K5 33.6
GTEX-11DXX-1626-SM-5H11H 33.2
GTEX-1399R-2026-SM-5K7WN 32.4
GTEX-11DXZ-1326-SM-5H11X 31.9
GTEX-ZYFG-2026-SM-5E43Y 31.2
GTEX-ZZ64-0526-SM-5GZXM 30.9
GTEX-XUZC-1426-SM-4BRV3 29.5
GTEX-XGQ4-1326-SM-4GIDU 29.2
GTEX-139T6-1026-SM-5IJGC 28.0
GTEX-ZYWO-1526-SM-5SIAL 27.2
GTEX-YEC4-1726-SM-4W21E 26.4
GTEX-133LE-1426-SM-5IFH1 24.8
GTEX-ZA64-1226-SM-5HL7B 24.7
GTEX-ZLFU-1526-SM-4WWBT 24.5
GTEX-13RTK-0826-SM-5Q5C6 24.4
GTEX-13O61-1326-SM-5KM31 24.2
GTEX-ZVP2-1726-SM-5GU5P 23.9
GTEX-XXEK-1026-SM-4BRUW 23.4
GTEX-X5EB-1626-SM-4E3IV 21.9
GTEX-14E6E-1626-SM-5RQI7 21.8
GTEX-13CF3-1226-SM-5LZXN 21.3
GTEX-VJYA-0926-SM-4KL1N 20.7
GTEX-ZEX8-1826-SM-57WBH 20.7
GTEX-ZTPG-2626-SM-57WFX 19.7
GTEX-ZVT2-2126-SM-5NQ93 19.1
GTEX-ZP4G-1626-SM-57WGD 19.0
GTEX-Y114-1426-SM-4TT6W 19.0
GTEX-11P82-0826-SM-5P9GU 18.9
GTEX-11XUK-1426-SM-5EQMG 18.8
GTEX-12BJ1-1926-SM-5HL9Z 18.2
GTEX-WQUQ-2426-SM-4MVNW 17.8
GTEX-WFG7-1726-SM-4LVME 17.6
GTEX-WFG8-1626-SM-4LVMB 17.6
GTEX-WFJO-0926-SM-4LVM2 16.0
GTEX-13O21-1026-SM-5IJDU 15.7
GTEX-XAJ8-0526-SM-47JYK 15.7
GTEX-1399U-2126-SM-5IFEZ 15.7
GTEX-Y5LM-1626-SM-4VDTB 15.6
GTEX-13FH7-1226-SM-5IJFK 15.5
GTEX-11NSD-1726-SM-5N9C3 15.5
GTEX-131XG-1726-SM-5LZUR 15.5
GTEX-WH7G-1626-SM-4LVMY 14.6
GTEX-ZPIC-2326-SM-57WDW 14.1
GTEX-WRHK-1026-SM-4MVOD 12.4
GTEX-12WSK-1526-SM-5CVNO 11.7
GTEX-Z9EW-0926-SM-5CVMM 11.6
GTEX-11VI4-1626-SM-5EQKO 10.5
GTEX-13QBU-1926-SM-5IJEW 10.1
GTEX-145ME-0926-SM-5O9AR 9.1
GTEX-Y3IK-1726-SM-4YCCR 8.6
GTEX-ZQG8-2526-SM-57WEQ 8.6
GTEX-X15G-1426-SM-4PQZK 8.0
GTEX-VUSG-1726-SM-4KKZL 6.4
GTEX-148VJ-2226-SM-5NQ9M 5.9
GTEX-ZQUD-0926-SM-57WE3 5.3
GTEX-13OVI-1926-SM-5IJCG 4.7
GTEX-1192X-2526-SM-59868 4.4
GTEX-13111-1426-SM-5DUW3 3.0
GTEX-ZC5H-2326-SM-4WAYT 2.8
GTEX-ZF2S-1726-SM-57WFT 2.5
GTEX-117YX-0326-SM-5GICL 2.4
GTEX-111CU-1326-SM-5NQ8L 2.4
GTEX-WEY5-1526-SM-4LMJF 2.4
GTEX-UPK5-2026-SM-4JBIM 2.0
GTEX-XMK1-1826-SM-4B66F 1.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

294.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 294.9
FF:10024-101D6 15,40,85 years, mixed 294.9

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