Tissue expression of ABL1 - Staining in cerebral cortex - The Human Protein Atlas

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ABL1

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TISSUE

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CELL

CANCER

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation

Dictionary
	Cerebral cortex


Tissue proteome
	Brain
	Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	33.9	TPM
GTEx:	10.0	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Low
Neuronal cells:	Low
Neuropil:	Not detected

Antibody staining	Antibody HPA027251		Antibody HPA027280		Antibody HPA028409		Antibody CAB002686
Endothelial cells	Not detected		Medium		Not detected		Not detected
Glial cells	Not detected		Medium		Not detected		Not detected
Neuronal cells	Low		Low		Low		Low
Neuropil	Low		Not detected		Medium		Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	33.9

N/A

Male, age 5

Sample 1
TPM: 22.7

overview

Female, age 40

Sample 2
TPM: 53.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

overview

Male, age 70

Sample 3
TPM: 25.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	10.0

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 11.4

Samples: 114

Max RPKM: 26.2
Min RPKM: 6.5
Std RPKM: 2.7
Median RPKM: 10.8

GTEX-13G51-3026-SM-5IJB8

26.2

GTEX-11GS4-3126-SM-5A5LH

18.1

GTEX-13JVG-3126-SM-5L3FH

17.5

GTEX-N7MT-1126-SM-5SI7V

17.5

GTEX-13OVJ-2826-SM-5L3GW

17.4

GTEX-1192X-3126-SM-5N9BY

17.2

GTEX-12ZZY-3026-SM-5GCOU

17.0

GTEX-NPJ8-1526-SM-2D7VU

16.9

Show all

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 8.5

Samples: 108

Max RPKM: 15.5
Min RPKM: 4.8
Std RPKM: 1.9
Median RPKM: 8.4

GTEX-13N2G-0011-R10a-SM-5MR34

15.5

GTEX-XMD1-0011-R10A-SM-4AT4A

13.7

GTEX-ZE7O-0011-R10a-SM-57WAZ

13.5

GTEX-13OVJ-0011-R10b-SM-5L3HT

12.0

GTEX-13SLW-0011-R10a-SM-5S2UI

12.0

GTEX-NPJ8-0011-R10A-SM-2YUMO

12.0

GTEX-12WSA-0011-R10b-SM-5P9ET

11.6

GTEX-11GSP-0011-R10a-SM-5NQ7J

11.4

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.