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CDHR5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:42.5TPM
GTEx:56.2RPKM
FANTOM5:1024.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA009081

  

Antibody HPA009173

  

Antibody CAB025004

  

Endothelial cells

 Not detected   Low   Not detected  

Glandular cells

 High   High   High  

Peripheral nerve/ganglion

 Not detected   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

42.5
overview Male, age 54
Sample 1
TPM: 7.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 56.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 66.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 18.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 29.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 27.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 60.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 58.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 38.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 49.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 76.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 39.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 24.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

56.2

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 60.8
Min RPKM: 0
Std RPKM: 6.8
Median RPKM: 0.2
GTEX-YEC3-2026-SM-4WWFL 60.8
GTEX-V955-1726-SM-4JBHF 42.2
GTEX-Y5LM-1426-SM-5RQJL 27.8
GTEX-XBED-1726-SM-47JYO 19.6
GTEX-11ONC-1926-SM-5GU75 15.1
GTEX-ZPCL-1626-SM-57WGC 14.9
GTEX-11EQ9-1526-SM-5PNY7 10.7
GTEX-XAJ8-0726-SM-47JY5 7.8
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 97.3
Samples: 196

Max RPKM: 375.8
Min RPKM: 0
Std RPKM: 84.6
Median RPKM: 95.5
GTEX-1122O-1526-SM-5N9CL 375.8
GTEX-14E6E-1526-SM-5RQIG 292.6
GTEX-R55G-1226-SM-48FDC 289.3
GTEX-ZVT2-1926-SM-5GU5T 268.8
GTEX-UJHI-1126-SM-4IHLN 263.4
GTEX-1399S-1926-SM-5J2M5 252.8
GTEX-ZLV1-1226-SM-4WWBX 249.4
GTEX-U3ZN-2126-SM-4DXU1 248.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1024.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1024.7
FF:10014-101C5 62,83,84 years, mixed 1024.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.