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CABIN1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.9TPM
GTEx:9.2RPKM
FANTOM5:22.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA043296

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA043296

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

12.9
N/A Female, age 80
Sample 1
TPM: 21.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 9.1
N/A Female, age 57
Sample 3
TPM: 10.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 15.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 7.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.1
Samples: 350

Max RPKM: 17.8
Min RPKM: 4.2
Std RPKM: 2.7
Median RPKM: 9.9
GTEX-11EQ8-0226-SM-5EQ5G 17.8
GTEX-OOBJ-0226-SM-2YUMM 17.3
GTEX-13U4I-0226-SM-5SIB1 17.1
GTEX-13111-1726-SM-5EGJZ 16.7
GTEX-YECK-0226-SM-4W215 16.6
GTEX-13NZ8-0926-SM-5MR3U 16.5
GTEX-131XF-2226-SM-5EQKG 16.4
GTEX-13OW6-0526-SM-5L3HY 16.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.8
Samples: 227

Max RPKM: 18
Min RPKM: 3.2
Std RPKM: 2.3
Median RPKM: 7.6
GTEX-13OW7-1126-SM-5K7V6 18.0
GTEX-X585-2526-SM-4QAS1 15.6
GTEX-11DXZ-1426-SM-5H12A 13.3
GTEX-14A6H-1026-SM-5SIAZ 13.1
GTEX-ZUA1-2126-SM-57YRB 12.7
GTEX-11DXX-2026-SM-5EGJL 12.5
GTEX-13NZ9-2026-SM-5KM1U 12.5
GTEX-Y8E4-1226-SM-5IFIM 12.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

22.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 22.8
FF:10010-101C1 65,65,76 years, mixed 22.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.