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CABIN1
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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:10.2TPM
GTEx:7.9RPKM
FANTOM5:23.4Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA043296

 

Squamous epithelial cells

Medium  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

10.2

overview Female, age 70
Sample 1
TPM: 9.8
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 9.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 11.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 7.9
Samples: 286

Max RPKM: 14.6
Min RPKM: 4.3
Std RPKM: 1.7
Median RPKM: 7.8
GTEX-1497J-2726-SM-5SI9W 14.6
GTEX-ZZPT-1426-SM-5N9C5 13.9
GTEX-R45C-1226-SM-48FEE 12.7
GTEX-11DYG-1326-SM-5N9DO 12.6
GTEX-T2IS-0826-SM-4DM6L 12.3
GTEX-P78B-1026-SM-3NMC4 12.2
GTEX-11TUW-1326-SM-5EQKV 12.1
GTEX-Y111-1626-SM-57WCY 12.0
GTEX-12ZZW-1726-SM-5DUVD 11.8
GTEX-UPK5-1226-SM-4IHL8 11.7
GTEX-X585-1226-SM-46MW7 11.7
GTEX-144GO-2726-SM-5O9A2 11.6
GTEX-13X6I-1026-SM-5LU4C 11.5
GTEX-144FL-2726-SM-5O98Z 11.4
GTEX-WK11-1026-SM-4OOS8 11.4
GTEX-YECK-1626-SM-5IFHQ 11.4
GTEX-R55D-1126-SM-48FEB 11.3
GTEX-145ME-0526-SM-5QGQV 11.2
GTEX-P4QS-0626-SM-3NMD1 11.2
GTEX-TSE9-1226-SM-4DXTM 11.2
GTEX-13U4I-1126-SM-5LU3S 11.1
GTEX-ZT9X-0526-SM-5GCOP 10.9
GTEX-TML8-1526-SM-4DXUX 10.8
GTEX-XV7Q-1126-SM-4BRVS 10.6
GTEX-UJMC-0926-SM-4IHLK 10.5
GTEX-139TU-1226-SM-5J2NL 10.4
GTEX-145LS-1826-SM-5LUAZ 10.4
GTEX-RNOR-1226-SM-48FDQ 10.4
GTEX-11DZ1-2026-SM-5A5KG 10.3
GTEX-145LV-1326-SM-5S2QI 10.3
GTEX-ZPU1-1426-SM-4WWFU 10.3
GTEX-ZDYS-0826-SM-4WWCR 10.2
GTEX-ZYT6-1126-SM-5GZYR 10.2
GTEX-13OVJ-1226-SM-5L3HA 10.1
GTEX-ZAB4-1126-SM-5HL86 10.1
GTEX-ZVE2-1326-SM-5NQ94 10.1
GTEX-ZAB5-0926-SM-5CVMV 10.0
GTEX-ZYW4-1326-SM-5E45N 10.0
GTEX-146FH-1726-SM-5QGQ2 9.9
GTEX-QEL4-1426-SM-447AC 9.9
GTEX-R3RS-1326-SM-48FE7 9.9
GTEX-XMD2-1326-SM-4YCET 9.9
GTEX-11ZU8-1526-SM-5EGHX 9.8
GTEX-146FQ-1026-SM-5LU8I 9.8
GTEX-RU72-0726-SM-46MUW 9.8
GTEX-14DAQ-1426-SM-5RQJD 9.7
GTEX-RUSQ-0826-SM-47JWW 9.7
GTEX-12WSA-1426-SM-5EGJU 9.6
GTEX-RVPV-0526-SM-47JYL 9.6
GTEX-U3ZH-1026-SM-4DXUZ 9.6
GTEX-13PVQ-1726-SM-5IFF3 9.5
GTEX-WQUQ-1626-SM-4OOSH 9.5
GTEX-R53T-1126-SM-48FD4 9.4
GTEX-ZF3C-1626-SM-4WWB4 9.4
GTEX-QVUS-0626-SM-447CC 9.3
GTEX-X62O-2226-SM-46MW3 9.3
GTEX-XBED-1026-SM-48TCB 9.3
GTEX-YJ89-1526-SM-5P9IR 9.3
GTEX-13X6K-2126-SM-5O9D4 9.2
GTEX-ZYVF-2226-SM-5GIDD 9.2
GTEX-14BIN-2726-SM-5RQIE 9.1
GTEX-S33H-0826-SM-4AD5Y 9.1
GTEX-S7SF-0926-SM-4AD4M 9.1
GTEX-13O3Q-0826-SM-5IFGF 9.0
GTEX-13W3W-1626-SM-5LU35 9.0
GTEX-OIZG-1026-SM-3LK5X 9.0
GTEX-UPIC-1026-SM-4IHLT 9.0
GTEX-11NUK-1326-SM-5P9GN 8.9
GTEX-PSDG-1326-SM-48TD2 8.9
GTEX-T5JC-1726-SM-4DM6U 8.9
GTEX-TMMY-1126-SM-4DXSX 8.9
GTEX-ZYY3-1526-SM-5SIA9 8.9
GTEX-11EMC-2226-SM-5A5JW 8.8
GTEX-1212Z-2126-SM-5FQTM 8.8
GTEX-12WSD-1826-SM-5GCOA 8.8
GTEX-NFK9-1126-SM-3LK78 8.8
GTEX-QLQW-0526-SM-4R1KS 8.8
GTEX-U3ZN-1726-SM-4DXUQ 8.8
GTEX-U4B1-0826-SM-4DXTW 8.8
GTEX-11ZTS-2626-SM-5EGIC 8.7
GTEX-N7MT-0326-SM-48TDP 8.7
GTEX-ZUA1-1226-SM-5NQ6O 8.7
GTEX-13FLV-1126-SM-5J2NO 8.6
GTEX-13NZB-1226-SM-5J2MW 8.6
GTEX-13S86-0826-SM-5SI6J 8.6
GTEX-145MF-1426-SM-5O9B6 8.6
GTEX-OXRP-0926-SM-48TC1 8.6
GTEX-PVOW-1626-SM-48TC9 8.6
GTEX-QEG5-1426-SM-447AS 8.6
GTEX-11VI4-0526-SM-5EQ48 8.5
GTEX-13111-0826-SM-5LZV3 8.5
GTEX-XLM4-2326-SM-4TT2D 8.5
GTEX-132Q8-1826-SM-5EGIY 8.4
GTEX-13FH7-0526-SM-5IJF8 8.4
GTEX-13G51-0926-SM-5IFFU 8.4
GTEX-13O1R-1326-SM-5IJF5 8.4
GTEX-13W46-1926-SM-5J2MF 8.4
GTEX-131YS-1426-SM-5IJF7 8.3
GTEX-144GM-1426-SM-5LU31 8.3
GTEX-PLZ5-0926-SM-3TW8L 8.3
GTEX-QEG4-0726-SM-4R1JL 8.3
GTEX-QLQ7-0926-SM-447BC 8.3
GTEX-R55E-1326-SM-48FCR 8.3
GTEX-RTLS-1126-SM-46MUQ 8.3
GTEX-S3XE-0926-SM-4AD4S 8.3
GTEX-V1D1-1026-SM-4JBHE 8.3
GTEX-X15G-0826-SM-4PQZD 8.3
GTEX-X3Y1-1326-SM-4PQZB 8.3
GTEX-111CU-0726-SM-5GZYD 8.2
GTEX-13OW8-2326-SM-5L3I9 8.2
GTEX-P4PP-0626-SM-3NM9X 8.2
GTEX-P4QT-0626-SM-3NMCP 8.2
GTEX-S32W-0926-SM-4AD5X 8.2
GTEX-X4EO-1226-SM-4QARR 8.2
GTEX-XQ8I-1526-SM-4BOOH 8.2
GTEX-11DXZ-1226-SM-5H11L 8.1
GTEX-12WSK-1126-SM-5LZV8 8.1
GTEX-145MN-1026-SM-5NQ9G 8.1
GTEX-TKQ1-0326-SM-4DXSM 8.1
GTEX-YF7O-0926-SM-5IFIF 8.1
GTEX-11GSP-1826-SM-5N9DQ 8.0
GTEX-1399U-1026-SM-5J1OC 8.0
GTEX-139UW-1126-SM-5IJEJ 8.0
GTEX-QDVJ-0726-SM-48U1W 8.0
GTEX-RWS6-0826-SM-47JXF 8.0
GTEX-XXEK-0326-SM-4BRVV 8.0
GTEX-ZF2S-1226-SM-4WWAX 8.0
GTEX-ZYWO-1026-SM-5E45U 8.0
GTEX-R55C-0826-SM-48FCL 7.9
GTEX-V955-1126-SM-4JBH3 7.9
GTEX-VUSG-1226-SM-4KKZF 7.9
GTEX-WFJO-0826-SM-4LVM5 7.9
GTEX-111YS-0926-SM-5EGGI 7.8
GTEX-11TT1-0526-SM-5P9JO 7.8
GTEX-11XUK-0826-SM-5GU6P 7.8
GTEX-1399Q-1126-SM-5P9JA 7.8
GTEX-148VJ-1026-SM-5LU98 7.8
GTEX-NPJ8-1926-SM-3MJGB 7.8
GTEX-OXRL-0626-SM-3NM9C 7.8
GTEX-PLZ4-1626-SM-3P618 7.8
GTEX-S95S-0426-SM-4B64I 7.8
GTEX-U8XE-1726-SM-4E3IF 7.8
GTEX-WH7G-0926-SM-4LVMJ 7.8
GTEX-XK95-1026-SM-4GIDV 7.8
GTEX-O5YV-1026-SM-3LK72 7.7
GTEX-P4PQ-0626-SM-3NMCU 7.7
GTEX-Q2AH-0826-SM-48TZN 7.7
GTEX-RN64-1026-SM-48FDX 7.7
GTEX-RU1J-0326-SM-46MUM 7.7
GTEX-X4LF-0626-SM-4QASB 7.7
GTEX-Y5V5-1626-SM-4VDSG 7.7
GTEX-ZPCL-1426-SM-57WEC 7.7
GTEX-131XF-0826-SM-5GICG 7.6
GTEX-133LE-0626-SM-5IFFJ 7.6
GTEX-13QJ3-1726-SM-5RQK9 7.6
GTEX-144GN-0626-SM-5O9B2 7.6
GTEX-OOBK-0625-SM-3LK5P 7.6
GTEX-SUCS-0726-SM-4DM7J 7.6
GTEX-WOFM-0626-SM-4OOS3 7.6
GTEX-12WSL-1526-SM-5GCP8 7.5
GTEX-13FHO-1726-SM-5IFGM 7.5
GTEX-13X6H-1326-SM-5LU42 7.5
GTEX-REY6-1326-SM-48FDO 7.5
GTEX-S4Q7-0626-SM-4AD5M 7.5
GTEX-SNOS-0626-SM-4DM5F 7.5
GTEX-WEY5-0926-SM-4LMI4 7.5
GTEX-Y3I4-1226-SM-4TT8N 7.5
GTEX-ZZ64-0226-SM-5E44X 7.5
GTEX-PLZ6-0526-SM-3P61C 7.4
GTEX-11EM3-0826-SM-5N9CC 7.3
GTEX-1211K-0926-SM-5FQTL 7.3
GTEX-1399R-0826-SM-5IJEL 7.3
GTEX-13CF3-1626-SM-5IFG9 7.3
GTEX-13O21-0626-SM-5IJDI 7.3
GTEX-OIZI-1426-SM-3NB1T 7.3
GTEX-QV44-1126-SM-4R1KO 7.3
GTEX-XBEW-1326-SM-4AT63 7.3
GTEX-XUZC-0426-SM-4BOPE 7.3
GTEX-11LCK-1726-SM-5S2OQ 7.2
GTEX-11NSD-1126-SM-5N9BQ 7.2
GTEX-12KS4-0926-SM-5BC5S 7.2
GTEX-139T6-0626-SM-5IFF9 7.2
GTEX-QDVN-1026-SM-48TZA 7.2
GTEX-XUJ4-1026-SM-4BOPB 7.2
GTEX-Y8LW-0726-SM-5IFI1 7.2
GTEX-Z9EW-0526-SM-5HL8S 7.2
GTEX-11ONC-1526-SM-5GU6S 7.1
GTEX-132QS-1426-SM-5P9GE 7.1
GTEX-13D11-1926-SM-5IFGB 7.1
GTEX-SNMC-0526-SM-4DM69 7.1
GTEX-XGQ4-1526-SM-4AT6H 7.1
GTEX-XMK1-1326-SM-4B65Q 7.1
GTEX-ZF29-1326-SM-4WWB6 7.1
GTEX-12696-1326-SM-5FQTJ 7.0
GTEX-147F3-0826-SM-5NQA7 7.0
GTEX-UJHI-0826-SM-4IHLM 7.0
GTEX-WVLH-1426-SM-4MVNX 7.0
GTEX-145LT-1126-SM-5LUA1 6.9
GTEX-145MO-1426-SM-5Q5BS 6.9
GTEX-QCQG-0626-SM-48U21 6.9
GTEX-VJYA-0726-SM-4KL1T 6.9
GTEX-W5WG-1626-SM-4LMKG 6.9
GTEX-WFON-0826-SM-4LVMI 6.9
GTEX-Y8E4-1726-SM-5LU9G 6.9
GTEX-ZA64-0626-SM-5HL9O 6.9
GTEX-11DXY-1426-SM-5N9CN 6.8
GTEX-11I78-1526-SM-5A5K7 6.8
GTEX-131XG-1026-SM-5GCMX 6.8
GTEX-13OVG-0626-SM-5IFEP 6.8
GTEX-13OVI-2626-SM-5KM4T 6.8
GTEX-Q2AI-0626-SM-48TZU 6.8
GTEX-SE5C-1226-SM-4BRWV 6.8
GTEX-XYKS-1526-SM-4BRUP 6.8
GTEX-12C56-1226-SM-5FQSU 6.7
GTEX-131XE-1426-SM-5HL7V 6.7
GTEX-13FTW-1626-SM-5KM4N 6.7
GTEX-WFG7-1126-SM-4LMK3 6.7
GTEX-WFG8-1226-SM-4V6EI 6.7
GTEX-ZQUD-0426-SM-57WFR 6.7
GTEX-14E6E-0726-SM-5S2R3 6.6
GTEX-T6MO-0526-SM-4DM6R 6.6
GTEX-U3ZM-0526-SM-4DXTB 6.6
GTEX-XOTO-2126-SM-4B64U 6.6
GTEX-13FTX-0526-SM-5IFGS 6.5
GTEX-14E1K-1226-SM-5S2PD 6.5
GTEX-OIZH-0626-SM-3NB1L 6.5
GTEX-QESD-0826-SM-47J4G 6.5
GTEX-R55G-1026-SM-48FDI 6.5
GTEX-S341-0526-SM-4AD5U 6.5
GTEX-OXRK-1326-SM-3NB1A 6.4
GTEX-ZE9C-1126-SM-4WWBD 6.4
GTEX-ZGAY-1126-SM-4WWBS 6.4
GTEX-11DXX-1126-SM-5GZZK 6.3
GTEX-12ZZY-1426-SM-5N9EI 6.3
GTEX-146FR-0426-SM-5SI97 6.3
GTEX-PWCY-0726-SM-48TCS 6.3
GTEX-RM2N-0726-SM-48FD5 6.3
GTEX-T8EM-0526-SM-4DM64 6.3
GTEX-Y5V6-1026-SM-4VBS2 6.3
GTEX-ZTX8-0226-SM-5E44D 6.3
GTEX-ZXES-1126-SM-5GZXN 6.3
GTEX-ZY6K-0626-SM-59HJL 6.3
GTEX-11P81-0826-SM-5P9GR 6.2
GTEX-132AR-2226-SM-5J2NT 6.2
GTEX-PWN1-0626-SM-48TDT 6.2
GTEX-117YX-1626-SM-5GZZG 6.1
GTEX-ZC5H-1326-SM-5HL7E 6.1
GTEX-ZVP2-1326-SM-57WCE 6.1
GTEX-1399S-1326-SM-5P9GH 6.0
GTEX-14AS3-0626-SM-5QGQD 6.0
GTEX-14H4A-1626-SM-5SI69 6.0
GTEX-S4P3-0426-SM-4AD56 6.0
GTEX-XQ3S-1126-SM-4BOPK 6.0
GTEX-ZG7Y-1126-SM-4WWEZ 6.0
GTEX-ZLV1-0526-SM-4WWD4 6.0
GTEX-1122O-1726-SM-5GICM 5.9
GTEX-Y114-0926-SM-4TT7J 5.9
GTEX-Y3IK-1126-SM-51MSV 5.9
GTEX-ZTPG-1626-SM-5DUX2 5.9
GTEX-11EQ9-0726-SM-5A5K2 5.8
GTEX-WRHK-0526-SM-4MVOF 5.8
GTEX-11P82-0526-SM-5986P 5.7
GTEX-12ZZX-1326-SM-5DUWI 5.7
GTEX-13PVR-1826-SM-5Q5CC 5.7
GTEX-14C38-2126-SM-5RQJO 5.7
GTEX-117YW-1926-SM-5H121 5.6
GTEX-14A6H-1326-SM-5NQBC 5.6
GTEX-14ICL-0526-SM-5RQJ6 5.6
GTEX-OXRN-1726-SM-3NM9B 5.6
GTEX-X4XY-1726-SM-46MVO 5.6
GTEX-YEC3-2526-SM-4YCDN 5.6
GTEX-YB5E-0926-SM-4WWDQ 5.5
GTEX-13QBU-1026-SM-5LU3R 5.4
GTEX-T5JW-1326-SM-4DM5G 5.4
GTEX-ZYFG-1126-SM-5GICY 5.4
GTEX-Y5LM-1026-SM-4VDSQ 5.2
GTEX-139YR-1726-SM-5IFFK 5.1
GTEX-13RTK-0526-SM-5S2QF 5.1
GTEX-Y9LG-0626-SM-4WWDH 5.1
GTEX-ZVT2-1326-SM-5E45H 5.1
GTEX-11P7K-1326-SM-5BC5G 5.0
GTEX-12BJ1-1626-SM-5HL8Y 5.0
GTEX-14BMU-0926-SM-5S2QB 5.0
GTEX-YFC4-1226-SM-5LU9R 4.8
GTEX-ZT9W-1326-SM-51MTB 4.7
GTEX-ZTSS-0626-SM-59867 4.3
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

23.4

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 23.4
FF:10015-101C6 68,74,75 years, mixed 23.4

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