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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:13.7TPM
GTEx:12.8RPKM
FANTOM5:36.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA043296

 

Glandular cells

Medium  
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

13.7

overview Male, age 65
Sample 1
TPM: 13.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 15.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 15.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 11.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

12.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 12.8
Samples: 88

Max RPKM: 21.1
Min RPKM: 6.9
Std RPKM: 3.3
Median RPKM: 12.3
GTEX-UPK5-2026-SM-4JBIM 21.1
GTEX-11NSD-1726-SM-5N9C3 20.9
GTEX-ZC5H-2326-SM-4WAYT 19.9
GTEX-WH7G-1626-SM-4LVMY 19.7
GTEX-11VI4-1626-SM-5EQKO 19.3
GTEX-VUSG-1726-SM-4KKZL 19.0
GTEX-WFJO-0926-SM-4LVM2 18.7
GTEX-X15G-1426-SM-4PQZK 18.5
GTEX-131XG-1726-SM-5LZUR 18.5
GTEX-11XUK-1426-SM-5EQMG 18.4
GTEX-WRHK-1026-SM-4MVOD 18.2
GTEX-Z9EW-0926-SM-5CVMM 16.9
GTEX-ZP4G-1626-SM-57WGD 16.9
GTEX-145ME-0926-SM-5O9AR 16.8
GTEX-ZVP2-1726-SM-5GU5P 16.5
GTEX-ZEX8-1826-SM-57WBH 16.3
GTEX-XAJ8-0526-SM-47JYK 16.0
GTEX-13111-1426-SM-5DUW3 15.8
GTEX-13O61-1326-SM-5KM31 15.2
GTEX-13FH7-1226-SM-5IJFK 15.2
GTEX-14E6E-1626-SM-5RQI7 14.7
GTEX-11P82-0826-SM-5P9GU 14.5
GTEX-11DXX-1626-SM-5H11H 14.2
GTEX-13QBU-1926-SM-5IJEW 14.1
GTEX-XBED-1426-SM-4AT4G 14.1
GTEX-ZF2S-1726-SM-57WFT 14.1
GTEX-111CU-1326-SM-5NQ8L 14.1
GTEX-XMK1-1826-SM-4B66F 14.0
GTEX-ZLFU-1526-SM-4WWBT 13.9
GTEX-WQUQ-2426-SM-4MVNW 13.9
GTEX-1399S-2026-SM-5KM4B 13.6
GTEX-VJYA-0926-SM-4KL1N 13.5
GTEX-ZQG8-2526-SM-57WEQ 13.5
GTEX-13OVI-1926-SM-5IJCG 13.4
GTEX-1192X-2526-SM-59868 13.4
GTEX-1399U-2126-SM-5IFEZ 13.3
GTEX-Y114-1426-SM-4TT6W 13.3
GTEX-XGQ4-1326-SM-4GIDU 13.2
GTEX-131XF-1326-SM-5GCMQ 12.7
GTEX-12BJ1-1926-SM-5HL9Z 12.6
GTEX-148VJ-2226-SM-5NQ9M 12.4
GTEX-11EQ9-1326-SM-5985X 12.4
GTEX-117YX-0326-SM-5GICL 12.3
GTEX-WEY5-1526-SM-4LMJF 12.3
GTEX-11P7K-1626-SM-5GU63 12.2
GTEX-11I78-1126-SM-5A5K5 12.2
GTEX-1399R-2026-SM-5K7WN 12.2
GTEX-139T6-1026-SM-5IJGC 12.0
GTEX-13O21-1026-SM-5IJDU 12.0
GTEX-13RTK-0826-SM-5Q5C6 12.0
GTEX-ZVT2-2126-SM-5NQ93 11.9
GTEX-ZYWO-1526-SM-5SIAL 11.7
GTEX-ZZ64-0526-SM-5GZXM 11.6
GTEX-11DXZ-1326-SM-5H11X 11.6
GTEX-WFG8-1626-SM-4LVMB 11.5
GTEX-Y5LM-1626-SM-4VDTB 11.5
GTEX-13CF3-1226-SM-5LZXN 11.3
GTEX-133LE-1426-SM-5IFH1 11.3
GTEX-ZTPG-2626-SM-57WFX 11.2
GTEX-XUZC-1426-SM-4BRV3 10.9
GTEX-13113-1226-SM-5EGHT 10.5
GTEX-12WSK-1526-SM-5CVNO 10.4
GTEX-YF7O-1826-SM-5IFIU 10.4
GTEX-Y3IK-1726-SM-4YCCR 10.2
GTEX-YB5E-1526-SM-5IFIE 10.2
GTEX-ZLV1-1126-SM-4WWBW 10.2
GTEX-WFG7-1726-SM-4LVME 10.0
GTEX-145LT-1026-SM-5LU9O 9.8
GTEX-13FTW-2026-SM-5IJE2 9.7
GTEX-139YR-2226-SM-5IFFW 9.7
GTEX-ZXES-1526-SM-5NQ95 9.7
GTEX-ZPIC-2326-SM-57WDW 9.7
GTEX-YEC4-1726-SM-4W21E 9.7
GTEX-ZQUD-0926-SM-57WE3 9.7
GTEX-ZVZP-1826-SM-5GZXB 9.5
GTEX-X5EB-1626-SM-4E3IV 9.5
GTEX-ZA64-1226-SM-5HL7B 9.5
GTEX-XXEK-1026-SM-4BRUW 9.4
GTEX-ZYFG-2026-SM-5E43Y 8.9
GTEX-14DAR-1426-SM-5RQIR 8.8
GTEX-ZTSS-0926-SM-59865 8.6
GTEX-1122O-1326-SM-5H11F 8.6
GTEX-ZTX8-0526-SM-59HLD 8.5
GTEX-Y9LG-1626-SM-5IFHM 8.4
GTEX-13D11-0726-SM-5LZZB 8.2
GTEX-13PL7-2626-SM-5IFH4 7.9
GTEX-111YS-1426-SM-5GID8 7.4
GTEX-ZPCL-1726-SM-57WEO 6.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

36.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 36.0
FF:10024-101D6 15,40,85 years, mixed 36.0

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by the Knut & Alice Wallenberg foundation.