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LGALS1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:88.2RPKM
FANTOM5:121.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not available
 
 

Antibody staining

Antibody HPA000646

 

Antibody CAB002157

 

Glial cells

Low   Low  

Neuronal cells

Medium  
      
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

88.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 88.2
Samples: 117

Max RPKM: 263.1
Min RPKM: 27.1
Std RPKM: 33.5
Median RPKM: 82.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 263.1
GTEX-139TT-0011-R5b-SM-5K7W8 187.7
GTEX-12WSA-0011-R5b-SM-5GU5I 169.6
GTEX-139T8-0011-R5b-SM-5J1MO 159.5
GTEX-13JUV-0011-R5a-SM-5LZY5 153.0
GTEX-13JVG-0011-R5a-SM-5MR4O 147.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 144.7
GTEX-13NYS-0011-R5a-SM-5MR4D 138.9
GTEX-13FLV-0011-R5a-SM-5LZWT 132.4
GTEX-132Q8-0011-R5a-SM-5IJDM 130.4
GTEX-12WSB-0011-R5b-SM-5GU67 129.7
GTEX-11H98-0011-R5b-SM-57WCF 125.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 121.2
GTEX-144GO-0011-R5a-SM-5PNUR 120.8
GTEX-NPJ7-0011-R5a-SM-33HBK 120.6
GTEX-OHPN-0011-R5A-SM-2I5FF 120.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 119.7
GTEX-13CIG-0011-R5b-SM-5L3F2 119.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 119.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 118.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 116.4
GTEX-X261-0011-R5A-SM-3NMB4 111.5
GTEX-13X6K-0011-R5b-SM-5PNUE 111.3
GTEX-X585-0011-R5A-SM-46MVI 111.2
GTEX-13NYB-0011-R5a-SM-5MR45 110.3
GTEX-1445S-0011-R5a-SM-5PNUS 109.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 108.9
GTEX-X4XX-0011-R5A-SM-46MWN 108.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 107.3
GTEX-NL4W-0011-R5a-SM-2I3GD 106.8
GTEX-N7MT-0011-R5a-SM-2I3G6 106.7
GTEX-13OVH-0011-R5b-SM-5KM4L 103.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 102.2
GTEX-ZV68-0011-R5a-SM-4YCDW 101.9
GTEX-ZVT3-0011-R5a-SM-51MSI 100.6
GTEX-NL3H-0011-R5a-SM-2I3GB 100.5
GTEX-13CF2-0011-R5a-SM-5LZWS 98.6
GTEX-XMD1-0011-R5A-SM-4AT47 95.9
GTEX-13X6I-0011-R5a-SM-5PNWW 94.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 93.6
GTEX-13112-0011-R5b-SM-5DUV8 93.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 93.4
GTEX-ZE7O-0011-R5a-SM-57WBO 92.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 92.3
GTEX-RVPV-0011-R5A-SM-2TF69 92.0
GTEX-139TS-0011-R5b-SM-5J2MZ 91.2
GTEX-YJ89-0011-R5a-SM-4V6GM 90.3
GTEX-1399T-0011-R5b-SM-5IJDK 89.9
GTEX-12WSH-0011-R5b-SM-5P9F3 89.8
GTEX-12ZZX-0011-R5a-SM-5HL89 89.5
GTEX-13FLW-0011-R5a-SM-5LZX6 88.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 88.3
GTEX-ZXG5-0011-R5b-SM-57WBN 88.0
GTEX-S7PM-0011-R5A-SM-3NM8G 86.7
GTEX-XOTO-0011-R5A-SM-4B657 85.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 84.9
GTEX-11UD1-0011-R5b-SM-5P9FP 84.1
GTEX-144GL-0011-R5b-SM-5PNUJ 84.0
GTEX-12WSF-0011-R5a-SM-5HL8K 82.3
GTEX-TSE9-0011-R5A-SM-3DB7J 81.4
GTEX-13CZV-0011-R5a-SM-5K7XA 80.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 80.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 79.8
GTEX-ZUA1-0011-R5b-SM-51MTG 79.4
GTEX-13NZA-0011-R5b-SM-5KM4K 78.1
GTEX-13OW7-0011-R5b-SM-5O9DM 77.1
GTEX-1477Z-0011-R5b-SM-5PNUO 77.1
GTEX-11GSP-0011-R5a-SM-57WBE 76.0
GTEX-13OW6-0011-R5a-SM-5O9BK 76.0
GTEX-14BIM-0011-R5b-SM-5S2RM 75.7
GTEX-13OW5-0011-R5b-SM-5L3FR 75.2
GTEX-QVJO-0011-R5A-SM-2S1QM 74.7
GTEX-WL46-0011-R5A-SM-3LK6V 74.6
GTEX-11NV4-0011-R5a-SM-5NQ88 74.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 73.4
GTEX-145MG-0011-R5b-SM-5S2VU 73.4
GTEX-T5JC-0011-R5A-SM-32PLK 72.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 71.9
GTEX-12WSC-0011-R5b-SM-5CVNS 71.5
GTEX-T6MN-0011-R5A-SM-32QPD 70.5
GTEX-13OVL-0011-R5b-SM-5L3FU 70.4
GTEX-11WQC-0011-R5a-SM-5BC74 70.2
GTEX-OXRN-0011-R5A-SM-2I5EF 69.0
GTEX-YFC4-0011-R5a-SM-4RGLR 67.5
GTEX-N7MS-0011-R5a-SM-2HMK8 66.4
GTEX-13FXS-0011-R5b-SM-5LZYE 66.0
GTEX-WWYW-0011-R5A-SM-3NB3E 65.7
GTEX-WVLH-0011-R5A-SM-3MJFW 65.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 65.1
GTEX-R55E-0011-R5A-SM-2TC5N 64.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 64.1
GTEX-13SLX-0011-R5a-SM-5O9BV 63.8
GTEX-13VXU-0011-R5a-SM-5O9D7 63.8
GTEX-14ABY-0011-R5b-SM-5SI7B 62.6
GTEX-RU72-0011-R5A-SM-2TF6U 61.7
GTEX-12WSD-0011-R5b-SM-5CVNG 61.4
GTEX-14BIN-0011-R5b-SM-5SI78 61.3
GTEX-1313W-0011-R5b-SM-5L3EP 59.8
GTEX-S7SE-0011-R5A-SM-2XCDA 58.5
GTEX-13FHP-0011-R5b-SM-5LZY2 58.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 58.0
GTEX-11OF3-0011-R5a-SM-57WB4 57.7
GTEX-145LS-0011-R5a-SM-5SI65 57.0
GTEX-145MH-0011-R5a-SM-5P9JT 56.5
GTEX-13G51-0011-R5a-SM-5L3EB 55.6
GTEX-131YS-0011-R5b-SM-5K7YB 55.0
GTEX-13S7M-0011-R5b-SM-5P9HS 52.8
GTEX-13O3O-0011-R5b-SM-5KM44 52.4
GTEX-13X6J-0011-R5b-SM-5PNWT 51.1
GTEX-WZTO-0011-R5B-SM-3NMC5 49.5
GTEX-QMR6-0011-R5A-SM-32PKT 46.4
GTEX-RVPU-0011-R5A-SM-2XCAD 46.4
GTEX-Z93S-0011-R5b-SM-4RGNI 44.4
GTEX-P44H-0011-R5A-SM-2XCEX 43.0
GTEX-PVOW-0011-R5A-SM-32PL7 30.6
GTEX-UTHO-0011-R5A-SM-3GIJD 30.5
GTEX-T2IS-0011-R5A-SM-32QP4 27.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

121.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 121.5
FF:10164-103B2 76 years, female 126.1
FF:10379-105H1 89 years, female 116.9

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