Fields »
ABOUT
HELP
BLOG
JOSD1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.3TPM
GTEx:20.3RPKM
FANTOM5:25.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA001168

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA001168

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

32.3
N/A Female, age 80
Sample 1
TPM: 24.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 14.9
N/A Female, age 57
Sample 3
TPM: 13.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 42.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 66.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

20.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.0
Samples: 350

Max RPKM: 31.3
Min RPKM: 7.7
Std RPKM: 3.4
Median RPKM: 18.6
GTEX-139D8-0326-SM-5IJCJ 31.3
GTEX-XQ8I-0526-SM-4BOPS 29.6
GTEX-POYW-0726-SM-2XCEO 29.1
GTEX-WVJS-0226-SM-4MVOU 28.3
GTEX-X261-0226-SM-3NMD2 28.0
GTEX-Y8E4-0726-SM-4WWFN 27.7
GTEX-145LS-0226-SM-5O9A5 27.2
GTEX-UTHO-0426-SM-5SI7N 26.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 22.4
Samples: 227

Max RPKM: 40
Min RPKM: 10.8
Std RPKM: 5.6
Median RPKM: 21.8
GTEX-ZG7Y-1626-SM-5S2NO 40.0
GTEX-XLM4-1026-SM-4AT51 39.6
GTEX-WFON-1226-SM-3TW8F 39.2
GTEX-139TU-1426-SM-5LZY9 38.5
GTEX-ZVZP-1126-SM-5GICU 36.1
GTEX-X585-2526-SM-4QAS1 34.6
GTEX-14753-2526-SM-5LU97 34.4
GTEX-13OVH-1126-SM-5K7YP 33.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

25.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 25.4
FF:10010-101C1 65,65,76 years, mixed 25.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.