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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:25.5TPM
GTEx:12.6RPKM
FANTOM5:29.3Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Not detected
 

Antibody staining

Antibody HPA001168

 

Squamous epithelial cells

Not detected  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

25.5

overview Female, age 70
Sample 1
TPM: 22.9
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 27.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 26.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

12.6

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 12.6
Samples: 286

Max RPKM: 25.6
Min RPKM: 6.4
Std RPKM: 3.2
Median RPKM: 12
GTEX-12KS4-0926-SM-5BC5S 25.6
GTEX-144GO-2726-SM-5O9A2 24.0
GTEX-145MF-1426-SM-5O9B6 22.4
GTEX-XLM4-2326-SM-4TT2D 22.0
GTEX-T5JW-1326-SM-4DM5G 21.8
GTEX-139TU-1226-SM-5J2NL 21.6
GTEX-1212Z-2126-SM-5FQTM 21.3
GTEX-13FLV-1126-SM-5J2NO 21.3
GTEX-XOTO-2126-SM-4B64U 20.9
GTEX-ZZPT-1426-SM-5N9C5 20.8
GTEX-11DZ1-2026-SM-5A5KG 20.2
GTEX-RUSQ-0826-SM-47JWW 20.2
GTEX-13PVQ-1726-SM-5IFF3 20.1
GTEX-11ZU8-1526-SM-5EGHX 20.0
GTEX-12WSA-1426-SM-5EGJU 18.9
GTEX-R45C-1226-SM-48FEE 18.8
GTEX-11XUK-0826-SM-5GU6P 18.0
GTEX-145LS-1826-SM-5LUAZ 18.0
GTEX-TMMY-1126-SM-4DXSX 18.0
GTEX-XMD2-1326-SM-4YCET 18.0
GTEX-13O1R-1326-SM-5IJF5 17.9
GTEX-145MO-1426-SM-5Q5BS 17.7
GTEX-144FL-2726-SM-5O98Z 17.6
GTEX-ZF3C-1626-SM-4WWB4 17.4
GTEX-R55D-1126-SM-48FEB 17.3
GTEX-YECK-1626-SM-5IFHQ 17.2
GTEX-U8XE-1726-SM-4E3IF 17.1
GTEX-132Q8-1826-SM-5EGIY 17.0
GTEX-PSDG-1326-SM-48TD2 16.8
GTEX-WOFM-0626-SM-4OOS3 16.7
GTEX-11GSP-1826-SM-5N9DQ 16.6
GTEX-13X6I-1026-SM-5LU4C 16.4
GTEX-ZYY3-1526-SM-5SIA9 16.2
GTEX-12ZZW-1726-SM-5DUVD 16.1
GTEX-13X6H-1326-SM-5LU42 16.1
GTEX-13OVJ-1226-SM-5L3HA 16.0
GTEX-P4QS-0626-SM-3NMD1 16.0
GTEX-139UW-1126-SM-5IJEJ 15.9
GTEX-Y114-0926-SM-4TT7J 15.9
GTEX-NPJ8-1926-SM-3MJGB 15.8
GTEX-QEG5-1426-SM-447AS 15.8
GTEX-S4P3-0426-SM-4AD56 15.8
GTEX-TSE9-1226-SM-4DXTM 15.8
GTEX-QVUS-0626-SM-447CC 15.7
GTEX-WVLH-1426-SM-4MVNX 15.6
GTEX-11ONC-1526-SM-5GU6S 15.4
GTEX-QLQ7-0926-SM-447BC 15.4
GTEX-13CF3-1626-SM-5IFG9 15.2
GTEX-11EM3-0826-SM-5N9CC 15.1
GTEX-11TUW-1326-SM-5EQKV 15.1
GTEX-X585-1226-SM-46MW7 15.1
GTEX-13NZB-1226-SM-5J2MW 15.0
GTEX-RNOR-1226-SM-48FDQ 15.0
GTEX-111YS-0926-SM-5EGGI 14.8
GTEX-131XF-0826-SM-5GICG 14.8
GTEX-1399U-1026-SM-5J1OC 14.8
GTEX-XV7Q-1126-SM-4BRVS 14.8
GTEX-ZZ64-0226-SM-5E44X 14.8
GTEX-11LCK-1726-SM-5S2OQ 14.7
GTEX-N7MT-0326-SM-48TDP 14.7
GTEX-XUZC-0426-SM-4BOPE 14.7
GTEX-Y5V5-1626-SM-4VDSG 14.6
GTEX-139T6-0626-SM-5IFF9 14.5
GTEX-PVOW-1626-SM-48TC9 14.5
GTEX-WFG7-1126-SM-4LMK3 14.5
GTEX-WK11-1026-SM-4OOS8 14.5
GTEX-13X6K-2126-SM-5O9D4 14.4
GTEX-Y9LG-0626-SM-4WWDH 14.4
GTEX-ZF29-1326-SM-4WWB6 14.4
GTEX-XK95-1026-SM-4GIDV 14.3
GTEX-14ICL-0526-SM-5RQJ6 14.2
GTEX-ZVE2-1326-SM-5NQ94 14.2
GTEX-ZYW4-1326-SM-5E45N 14.2
GTEX-ZAB4-1126-SM-5HL86 14.1
GTEX-RU72-0726-SM-46MUW 14.0
GTEX-Y111-1626-SM-57WCY 14.0
GTEX-1211K-0926-SM-5FQTL 13.9
GTEX-O5YV-1026-SM-3LK72 13.9
GTEX-S4Q7-0626-SM-4AD5M 13.9
GTEX-WFG8-1226-SM-4V6EI 13.8
GTEX-12C56-1226-SM-5FQSU 13.7
GTEX-UPK5-1226-SM-4IHL8 13.7
GTEX-14DAQ-1426-SM-5RQJD 13.6
GTEX-11DYG-1326-SM-5N9DO 13.5
GTEX-133LE-0626-SM-5IFFJ 13.5
GTEX-13O21-0626-SM-5IJDI 13.5
GTEX-1497J-2726-SM-5SI9W 13.5
GTEX-146FQ-1026-SM-5LU8I 13.4
GTEX-PWN1-0626-SM-48TDT 13.4
GTEX-RM2N-0726-SM-48FD5 13.4
GTEX-S3XE-0926-SM-4AD4S 13.4
GTEX-X4XY-1726-SM-46MVO 13.4
GTEX-ZYT6-1126-SM-5GZYR 13.4
GTEX-145ME-0526-SM-5QGQV 13.3
GTEX-OXRL-0626-SM-3NM9C 13.3
GTEX-QLQW-0526-SM-4R1KS 13.3
GTEX-R3RS-1326-SM-48FE7 13.3
GTEX-R55C-0826-SM-48FCL 13.3
GTEX-ZTX8-0226-SM-5E44D 13.3
GTEX-14E6E-0726-SM-5S2R3 13.2
GTEX-T2IS-0826-SM-4DM6L 13.2
GTEX-ZYVF-2226-SM-5GIDD 13.2
GTEX-11TT1-0526-SM-5P9JO 13.1
GTEX-13W46-1926-SM-5J2MF 13.1
GTEX-P4QT-0626-SM-3NMCP 13.1
GTEX-13U4I-1126-SM-5LU3S 13.0
GTEX-P78B-1026-SM-3NMC4 13.0
GTEX-12WSD-1826-SM-5GCOA 12.9
GTEX-14E1K-1226-SM-5S2PD 12.9
GTEX-RTLS-1126-SM-46MUQ 12.9
GTEX-11DXX-1126-SM-5GZZK 12.8
GTEX-WEY5-0926-SM-4LMI4 12.8
GTEX-X4EO-1226-SM-4QARR 12.8
GTEX-YJ89-1526-SM-5P9IR 12.8
GTEX-ZA64-0626-SM-5HL9O 12.8
GTEX-11ZTS-2626-SM-5EGIC 12.7
GTEX-12WSK-1126-SM-5LZV8 12.7
GTEX-13111-0826-SM-5LZV3 12.7
GTEX-14BMU-0926-SM-5S2QB 12.7
GTEX-S341-0526-SM-4AD5U 12.7
GTEX-UPIC-1026-SM-4IHLT 12.7
GTEX-ZDYS-0826-SM-4WWCR 12.7
GTEX-13RTK-0526-SM-5S2QF 12.6
GTEX-ZT9X-0526-SM-5GCOP 12.6
GTEX-117YW-1926-SM-5H121 12.5
GTEX-145MN-1026-SM-5NQ9G 12.5
GTEX-RVPV-0526-SM-47JYL 12.5
GTEX-V955-1126-SM-4JBH3 12.5
GTEX-ZAB5-0926-SM-5CVMV 12.5
GTEX-11NUK-1326-SM-5P9GN 12.4
GTEX-RU1J-0326-SM-46MUM 12.4
GTEX-T6MO-0526-SM-4DM6R 12.4
GTEX-WFJO-0826-SM-4LVM5 12.4
GTEX-131XE-1426-SM-5HL7V 12.3
GTEX-Y8LW-0726-SM-5IFI1 12.3
GTEX-11I78-1526-SM-5A5K7 12.2
GTEX-SNOS-0626-SM-4DM5F 12.2
GTEX-U3ZN-1726-SM-4DXUQ 12.2
GTEX-147F3-0826-SM-5NQA7 12.1
GTEX-XGQ4-1526-SM-4AT6H 12.1
GTEX-12WSL-1526-SM-5GCP8 12.0
GTEX-13QBU-1026-SM-5LU3R 12.0
GTEX-13S86-0826-SM-5SI6J 12.0
GTEX-ZYFG-1126-SM-5GICY 12.0
GTEX-144GM-1426-SM-5LU31 11.9
GTEX-14BIN-2726-SM-5RQIE 11.9
GTEX-OXRN-1726-SM-3NM9B 11.9
GTEX-XBED-1026-SM-48TCB 11.9
GTEX-146FR-0426-SM-5SI97 11.8
GTEX-14H4A-1626-SM-5SI69 11.8
GTEX-OOBK-0625-SM-3LK5P 11.8
GTEX-X15G-0826-SM-4PQZD 11.8
GTEX-XUJ4-1026-SM-4BOPB 11.8
GTEX-ZYWO-1026-SM-5E45U 11.8
GTEX-146FH-1726-SM-5QGQ2 11.7
GTEX-SE5C-1226-SM-4BRWV 11.7
GTEX-U3ZH-1026-SM-4DXUZ 11.7
GTEX-OIZI-1426-SM-3NB1T 11.6
GTEX-UJMC-0926-SM-4IHLK 11.6
GTEX-PLZ5-0926-SM-3TW8L 11.5
GTEX-R55G-1026-SM-48FDI 11.5
GTEX-SNMC-0526-SM-4DM69 11.5
GTEX-WRHK-0526-SM-4MVOF 11.5
GTEX-Y5V6-1026-SM-4VBS2 11.5
GTEX-YF7O-0926-SM-5IFIF 11.5
GTEX-YFC4-1226-SM-5LU9R 11.5
GTEX-ZC5H-1326-SM-5HL7E 11.5
GTEX-S7SF-0926-SM-4AD4M 11.4
GTEX-WH7G-0926-SM-4LVMJ 11.4
GTEX-X62O-2226-SM-46MW3 11.4
GTEX-132QS-1426-SM-5P9GE 11.3
GTEX-145LT-1126-SM-5LUA1 11.3
GTEX-PLZ4-1626-SM-3P618 11.3
GTEX-ZUA1-1226-SM-5NQ6O 11.3
GTEX-131XG-1026-SM-5GCMX 11.2
GTEX-13O3Q-0826-SM-5IFGF 11.2
GTEX-13W3W-1626-SM-5LU35 11.2
GTEX-P4PP-0626-SM-3NM9X 11.2
GTEX-QCQG-0626-SM-48U21 11.2
GTEX-SUCS-0726-SM-4DM7J 11.2
GTEX-UJHI-0826-SM-4IHLM 11.2
GTEX-13FH7-0526-SM-5IJF8 11.1
GTEX-13FHO-1726-SM-5IFGM 11.1
GTEX-NFK9-1126-SM-3LK78 11.1
GTEX-OIZH-0626-SM-3NB1L 11.1
GTEX-QEG4-0726-SM-4R1JL 11.1
GTEX-R55E-1326-SM-48FCR 11.1
GTEX-Y3I4-1226-SM-4TT8N 11.1
GTEX-13FTW-1626-SM-5KM4N 11.0
GTEX-148VJ-1026-SM-5LU98 11.0
GTEX-RWS6-0826-SM-47JXF 11.0
GTEX-U3ZM-0526-SM-4DXTB 11.0
GTEX-XMK1-1326-SM-4B65Q 11.0
GTEX-ZT9W-1326-SM-51MTB 11.0
GTEX-11VI4-0526-SM-5EQ48 10.9
GTEX-12ZZX-1326-SM-5DUWI 10.9
GTEX-12ZZY-1426-SM-5N9EI 10.9
GTEX-13G51-0926-SM-5IFFU 10.9
GTEX-Q2AH-0826-SM-48TZN 10.9
GTEX-QDVN-1026-SM-48TZA 10.9
GTEX-ZGAY-1126-SM-4WWBS 10.9
GTEX-12BJ1-1626-SM-5HL8Y 10.8
GTEX-TML8-1526-SM-4DXUX 10.8
GTEX-11EMC-2226-SM-5A5JW 10.7
GTEX-11EQ9-0726-SM-5A5K2 10.7
GTEX-11NSD-1126-SM-5N9BQ 10.7
GTEX-13OVI-2626-SM-5KM4T 10.7
GTEX-QEL4-1426-SM-447AC 10.7
GTEX-S32W-0926-SM-4AD5X 10.7
GTEX-WQUQ-1626-SM-4OOSH 10.7
GTEX-XYKS-1526-SM-4BRUP 10.7
GTEX-Z9EW-0526-SM-5HL8S 10.7
GTEX-111CU-0726-SM-5GZYD 10.6
GTEX-13OW8-2326-SM-5L3I9 10.6
GTEX-QESD-0826-SM-47J4G 10.6
GTEX-XXEK-0326-SM-4BRVV 10.6
GTEX-Y5LM-1026-SM-4VDSQ 10.6
GTEX-R53T-1126-SM-48FD4 10.5
GTEX-S33H-0826-SM-4AD5Y 10.5
GTEX-X4LF-0626-SM-4QASB 10.5
GTEX-14C38-2126-SM-5RQJO 10.4
GTEX-QV44-1126-SM-4R1KO 10.4
GTEX-T5JC-1726-SM-4DM6U 10.4
GTEX-VUSG-1226-SM-4KKZF 10.4
GTEX-ZPCL-1426-SM-57WEC 10.4
GTEX-144GN-0626-SM-5O9B2 10.3
GTEX-P4PQ-0626-SM-3NMCU 10.3
GTEX-XQ8I-1526-SM-4BOOH 10.3
GTEX-139YR-1726-SM-5IFFK 10.2
GTEX-OXRP-0926-SM-48TC1 10.2
GTEX-PLZ6-0526-SM-3P61C 10.2
GTEX-12696-1326-SM-5FQTJ 10.1
GTEX-OXRK-1326-SM-3NB1A 10.1
GTEX-XBEW-1326-SM-4AT63 10.1
GTEX-ZTPG-1626-SM-5DUX2 10.1
GTEX-ZVP2-1326-SM-57WCE 10.1
GTEX-ZPU1-1426-SM-4WWFU 10.0
GTEX-1399Q-1126-SM-5P9JA 9.9
GTEX-13QJ3-1726-SM-5RQK9 9.9
GTEX-PWCY-0726-SM-48TCS 9.9
GTEX-ZXES-1126-SM-5GZXN 9.9
GTEX-11P82-0526-SM-5986P 9.8
GTEX-13OVG-0626-SM-5IFEP 9.8
GTEX-T8EM-0526-SM-4DM64 9.8
GTEX-U4B1-0826-SM-4DXTW 9.7
GTEX-VJYA-0726-SM-4KL1T 9.6
GTEX-13D11-1926-SM-5IFGB 9.5
GTEX-Q2AI-0626-SM-48TZU 9.5
GTEX-RN64-1026-SM-48FDX 9.5
GTEX-11DXY-1426-SM-5N9CN 9.3
GTEX-1122O-1726-SM-5GICM 9.2
GTEX-QDVJ-0726-SM-48U1W 9.2
GTEX-V1D1-1026-SM-4JBHE 9.2
GTEX-ZF2S-1226-SM-4WWAX 9.2
GTEX-ZQUD-0426-SM-57WFR 9.2
GTEX-145LV-1326-SM-5S2QI 9.1
GTEX-W5WG-1626-SM-4LMKG 9.1
GTEX-117YX-1626-SM-5GZZG 9.0
GTEX-TKQ1-0326-SM-4DXSM 8.9
GTEX-ZY6K-0626-SM-59HJL 8.9
GTEX-11P81-0826-SM-5P9GR 8.8
GTEX-1399S-1326-SM-5P9GH 8.8
GTEX-WFON-0826-SM-4LVMI 8.8
GTEX-YEC3-2526-SM-4YCDN 8.8
GTEX-132AR-2226-SM-5J2NT 8.7
GTEX-XQ3S-1126-SM-4BOPK 8.6
GTEX-Y8E4-1726-SM-5LU9G 8.6
GTEX-OIZG-1026-SM-3LK5X 8.5
GTEX-YB5E-0926-SM-4WWDQ 8.5
GTEX-13PVR-1826-SM-5Q5CC 8.4
GTEX-S95S-0426-SM-4B64I 8.4
GTEX-ZLV1-0526-SM-4WWD4 8.3
GTEX-131YS-1426-SM-5IJF7 8.2
GTEX-REY6-1326-SM-48FDO 8.2
GTEX-ZG7Y-1126-SM-4WWEZ 8.2
GTEX-ZVT2-1326-SM-5E45H 8.1
GTEX-ZE9C-1126-SM-4WWBD 8.0
GTEX-X3Y1-1326-SM-4PQZB 7.6
GTEX-Y3IK-1126-SM-51MSV 7.6
GTEX-ZTSS-0626-SM-59867 7.6
GTEX-11P7K-1326-SM-5BC5G 7.3
GTEX-13FTX-0526-SM-5IFGS 7.3
GTEX-14A6H-1326-SM-5NQBC 7.1
GTEX-11DXZ-1226-SM-5H11L 7.0
GTEX-14AS3-0626-SM-5QGQD 6.7
GTEX-1399R-0826-SM-5IJEL 6.4
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

29.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 29.3
FF:10015-101C6 68,74,75 years, mixed 29.3

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