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AP1B1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:34.6TPM
GTEx:22.6RPKM
FANTOM5:111.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA068520

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

34.6
overview Male, age 54
Sample 1
TPM: 30.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 35.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 33.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 34.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 31.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 30.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 31.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 38.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 29.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 36.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 51.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 37.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 29.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

22.6

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 17.0
Samples: 149

Max RPKM: 27.7
Min RPKM: 11.5
Std RPKM: 2.6
Median RPKM: 16.5
GTEX-YEC3-2026-SM-4WWFL 27.7
GTEX-WFON-1326-SM-4LVMN 26.8
GTEX-131XG-1526-SM-5GCNQ 24.3
GTEX-11TT1-0926-SM-5GU5M 23.0
GTEX-11EQ9-1526-SM-5PNY7 22.8
GTEX-ZV6S-1126-SM-57WE9 22.6
GTEX-111CU-1226-SM-5EGIN 22.5
GTEX-12WSJ-1426-SM-5GCON 22.0
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 26.8
Samples: 196

Max RPKM: 51.3
Min RPKM: 9.5
Std RPKM: 8
Median RPKM: 26.6
GTEX-131XG-1826-SM-5LZV4 51.3
GTEX-1399R-2226-SM-5P9JB 45.2
GTEX-UJHI-1126-SM-4IHLN 42.4
GTEX-Q2AI-0926-SM-48U1F 42.2
GTEX-O5YT-1426-SM-3MJHC 41.9
GTEX-144GN-1126-SM-5LU33 41.7
GTEX-146FQ-1926-SM-5NQBY 40.8
GTEX-11EM3-1526-SM-5A5KN 39.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

111.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 111.5
FF:10014-101C5 62,83,84 years, mixed 111.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.