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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:47.2TPM
GTEx:37.5RPKM
FANTOM5:155.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA068520

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

47.2

overview Male, age 65
Sample 1
TPM: 41.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 43.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 56.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 47.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

37.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 37.5
Samples: 88

Max RPKM: 68.4
Min RPKM: 15.5
Std RPKM: 11.4
Median RPKM: 35.7
GTEX-WH7G-1626-SM-4LVMY 68.4
GTEX-11VI4-1626-SM-5EQKO 66.1
GTEX-WFJO-0926-SM-4LVM2 64.4
GTEX-13O61-1326-SM-5KM31 58.9
GTEX-11P82-0826-SM-5P9GU 57.6
GTEX-1399U-2126-SM-5IFEZ 56.2
GTEX-13FH7-1226-SM-5IJFK 55.4
GTEX-131XG-1726-SM-5LZUR 54.6
GTEX-ZVP2-1726-SM-5GU5P 54.6
GTEX-ZLFU-1526-SM-4WWBT 52.9
GTEX-Z9EW-0926-SM-5CVMM 52.1
GTEX-ZVT2-2126-SM-5NQ93 51.8
GTEX-WRHK-1026-SM-4MVOD 51.6
GTEX-11NSD-1726-SM-5N9C3 51.6
GTEX-12BJ1-1926-SM-5HL9Z 49.5
GTEX-ZZ64-0526-SM-5GZXM 49.1
GTEX-XGQ4-1326-SM-4GIDU 47.2
GTEX-1399S-2026-SM-5KM4B 45.8
GTEX-UPK5-2026-SM-4JBIM 45.7
GTEX-11XUK-1426-SM-5EQMG 45.1
GTEX-11EQ9-1326-SM-5985X 45.1
GTEX-14E6E-1626-SM-5RQI7 44.1
GTEX-ZEX8-1826-SM-57WBH 44.1
GTEX-WFG8-1626-SM-4LVMB 43.9
GTEX-X15G-1426-SM-4PQZK 43.6
GTEX-XAJ8-0526-SM-47JYK 42.8
GTEX-11I78-1126-SM-5A5K5 42.7
GTEX-13FTW-2026-SM-5IJE2 42.6
GTEX-11DXX-1626-SM-5H11H 42.1
GTEX-Y5LM-1626-SM-4VDTB 41.4
GTEX-145LT-1026-SM-5LU9O 41.0
GTEX-XUZC-1426-SM-4BRV3 40.9
GTEX-ZP4G-1626-SM-57WGD 39.9
GTEX-131XF-1326-SM-5GCMQ 39.3
GTEX-13QBU-1926-SM-5IJEW 39.2
GTEX-133LE-1426-SM-5IFH1 38.8
GTEX-ZYFG-2026-SM-5E43Y 38.0
GTEX-YB5E-1526-SM-5IFIE 38.0
GTEX-VUSG-1726-SM-4KKZL 37.9
GTEX-139T6-1026-SM-5IJGC 37.6
GTEX-148VJ-2226-SM-5NQ9M 36.0
GTEX-ZVZP-1826-SM-5GZXB 36.0
GTEX-11P7K-1626-SM-5GU63 35.8
GTEX-ZLV1-1126-SM-4WWBW 35.8
GTEX-145ME-0926-SM-5O9AR 35.5
GTEX-ZQG8-2526-SM-57WEQ 35.5
GTEX-13CF3-1226-SM-5LZXN 35.4
GTEX-14DAR-1426-SM-5RQIR 35.1
GTEX-ZA64-1226-SM-5HL7B 35.1
GTEX-ZYWO-1526-SM-5SIAL 35.0
GTEX-13D11-0726-SM-5LZZB 34.4
GTEX-ZTX8-0526-SM-59HLD 34.2
GTEX-ZXES-1526-SM-5NQ95 34.1
GTEX-WEY5-1526-SM-4LMJF 33.9
GTEX-Y114-1426-SM-4TT6W 33.5
GTEX-ZC5H-2326-SM-4WAYT 33.1
GTEX-WQUQ-2426-SM-4MVNW 32.7
GTEX-1122O-1326-SM-5H11F 32.7
GTEX-ZTSS-0926-SM-59865 31.9
GTEX-YF7O-1826-SM-5IFIU 31.9
GTEX-X5EB-1626-SM-4E3IV 31.5
GTEX-13RTK-0826-SM-5Q5C6 31.5
GTEX-13113-1226-SM-5EGHT 31.3
GTEX-XBED-1426-SM-4AT4G 30.8
GTEX-VJYA-0926-SM-4KL1N 30.3
GTEX-ZTPG-2626-SM-57WFX 29.8
GTEX-Y9LG-1626-SM-5IFHM 29.4
GTEX-ZPCL-1726-SM-57WEO 28.7
GTEX-13PL7-2626-SM-5IFH4 28.6
GTEX-11DXZ-1326-SM-5H11X 28.5
GTEX-YEC4-1726-SM-4W21E 28.1
GTEX-1399R-2026-SM-5K7WN 27.5
GTEX-ZPIC-2326-SM-57WDW 27.2
GTEX-WFG7-1726-SM-4LVME 27.1
GTEX-13O21-1026-SM-5IJDU 26.5
GTEX-111YS-1426-SM-5GID8 26.1
GTEX-XXEK-1026-SM-4BRUW 25.7
GTEX-13111-1426-SM-5DUW3 25.3
GTEX-111CU-1326-SM-5NQ8L 24.5
GTEX-139YR-2226-SM-5IFFW 24.1
GTEX-117YX-0326-SM-5GICL 21.9
GTEX-12WSK-1526-SM-5CVNO 21.8
GTEX-Y3IK-1726-SM-4YCCR 20.0
GTEX-XMK1-1826-SM-4B66F 18.9
GTEX-ZF2S-1726-SM-57WFT 17.7
GTEX-1192X-2526-SM-59868 16.7
GTEX-13OVI-1926-SM-5IJCG 16.4
GTEX-ZQUD-0926-SM-57WE3 15.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

155.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 155.7
FF:10024-101D6 15,40,85 years, mixed 155.7

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