We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
AP1B1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:64.7TPM
GTEx:52.2RPKM
FANTOM5:145.8Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA068520

 

Cells in red pulp

Low  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

64.7

overview Female, age 60
Sample 1
TPM: 66.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 62.5
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 76.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 74.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 43.0
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

52.2

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 52.2
Samples: 104

Max RPKM: 86.4
Min RPKM: 31.5
Std RPKM: 9.6
Median RPKM: 51.8
GTEX-XPVG-0626-SM-4B65B 86.4
GTEX-12WSJ-0526-SM-5GCOZ 74.4
GTEX-X4LF-0226-SM-4QAS8 74.2
GTEX-O5YT-0926-SM-48TDG 73.8
GTEX-1211K-0426-SM-5FQTP 72.0
GTEX-ZVZP-0726-SM-59HKA 69.0
GTEX-QDVN-0526-SM-48TZ4 68.2
GTEX-XUJ4-0226-SM-4BOP8 66.8
GTEX-S4Z8-0226-SM-4AD5K 65.2
GTEX-13FH7-1326-SM-5IFG8 64.8
GTEX-P4QS-0926-SM-48TBS 64.2
GTEX-12WSK-0126-SM-5GCO7 63.8
GTEX-QV31-0126-SM-447BP 61.6
GTEX-YB5K-1926-SM-4VDT4 60.9
GTEX-146FR-1926-SM-5NQA6 60.0
GTEX-OIZH-0926-SM-48TBR 59.4
GTEX-12BJ1-0726-SM-5EGGF 58.9
GTEX-1399S-0226-SM-5IFFG 58.4
GTEX-R55G-0226-SM-48FEI 58.4
GTEX-X3Y1-0126-SM-4PQZA 58.2
GTEX-S3XE-0626-SM-4AD6B 58.1
GTEX-1122O-0526-SM-5N9DM 57.9
GTEX-XAJ8-0126-SM-47JYG 57.9
GTEX-YEC4-0126-SM-4W21T 57.9
GTEX-14E6E-1226-SM-5S2R5 57.6
GTEX-XQ8I-1726-SM-4BOQB 57.6
GTEX-Y114-0726-SM-4TT6U 56.8
GTEX-T5JW-0126-SM-4DM6K 56.7
GTEX-WFON-0126-SM-4LVM9 56.6
GTEX-ZDTT-1026-SM-5KM19 56.6
GTEX-YB5E-0426-SM-5IFHR 56.3
GTEX-12WSN-0126-SM-5DUX5 56.0
GTEX-11XUK-0426-SM-5EQML 55.9
GTEX-13CF3-0226-SM-5J1NW 55.9
GTEX-ZLFU-0526-SM-4WWBN 55.9
GTEX-131XG-0426-SM-5IFGD 55.5
GTEX-UJHI-0126-SM-4IHLP 55.3
GTEX-144GN-2126-SM-5O99D 54.5
GTEX-QLQW-0126-SM-447BK 54.5
GTEX-139T6-0226-SM-5IFGZ 54.4
GTEX-RUSQ-0126-SM-47JWV 54.3
GTEX-11VI4-0126-SM-5GU6Z 54.2
GTEX-Y5LM-0326-SM-4VBRN 54.2
GTEX-Y3I4-0126-SM-4TT26 54.0
GTEX-W5WG-0626-SM-4SOID 53.9
GTEX-11DXX-0726-SM-5H12X 53.5
GTEX-11EQ9-0426-SM-5A5JY 53.1
GTEX-ZVP2-0526-SM-51MSC 53.1
GTEX-13N11-0126-SM-5KM2Z 53.0
GTEX-XGQ4-0126-SM-4AT4H 53.0
GTEX-U4B1-0526-SM-4DXTK 52.0
GTEX-U3ZH-0126-SM-4DXUK 51.9
GTEX-Q2AH-0226-SM-48U1I 51.6
GTEX-ZLWG-0426-SM-4WWFA 51.5
GTEX-WHWD-0126-SM-4OORS 51.2
GTEX-YFCO-0926-SM-5LUA5 51.0
GTEX-ZYFG-0726-SM-5GIDX 50.6
GTEX-ZPU1-1026-SM-4YCEQ 50.4
GTEX-11LCK-0126-SM-5A5M5 50.3
GTEX-13111-0126-SM-5EGHO 50.2
GTEX-132QS-0226-SM-5IFFZ 50.2
GTEX-13PVR-0326-SM-5RQJY 50.2
GTEX-ZP4G-0326-SM-4YCEF 50.1
GTEX-13PL7-1126-SM-5MR5O 50.0
GTEX-13VXT-1326-SM-5LU3Y 49.7
GTEX-13X6H-0726-SM-5Q5BX 49.3
GTEX-QMRM-0226-SM-4R1K7 49.2
GTEX-117YX-2126-SM-5GIEL 48.9
GTEX-Y8LW-0126-SM-4VBS1 48.5
GTEX-U3ZN-0126-SM-4DXUM 48.2
GTEX-XMK1-0126-SM-4B65F 48.1
GTEX-ZV6S-0826-SM-5NQ6Z 48.1
GTEX-11NSD-0426-SM-5N9CR 48.0
GTEX-14DAR-0326-SM-5S2PS 47.9
GTEX-PX3G-0926-SM-48U12 47.7
GTEX-XXEK-0126-SM-4BRVU 47.7
GTEX-OOBJ-0926-SM-48TDO 47.3
GTEX-Z9EW-0726-SM-5HL9H 46.9
GTEX-145MN-0126-SM-5RQHY 46.5
GTEX-147F3-0126-SM-5NQBJ 46.5
GTEX-POMQ-0126-SM-48TD6 46.5
GTEX-P4PP-0926-SM-48TBZ 46.4
GTEX-XV7Q-0126-SM-4BRVK 46.4
GTEX-VJYA-0126-SM-4KL1P 46.2
GTEX-PLZ6-0126-SM-48TC6 45.9
GTEX-1399R-0226-SM-5IJGG 45.5
GTEX-QCQG-0226-SM-48U28 44.7
GTEX-ZZPU-0126-SM-5E446 44.6
GTEX-146FQ-0626-SM-5LU9U 42.9
GTEX-ZYWO-0226-SM-5GZX3 42.5
GTEX-PW2O-0126-SM-48TC8 42.3
GTEX-UPK5-1626-SM-4JBHI 41.6
GTEX-11P7K-0426-SM-5BC5H 39.7
GTEX-131XE-1126-SM-5EGHW 39.3
GTEX-QV44-0126-SM-4R1KH 39.2
GTEX-12WSG-0926-SM-5EGIH 38.2
GTEX-11P81-1326-SM-5GU5S 36.8
GTEX-ZAB5-0526-SM-5CVMU 35.9
GTEX-Y3IK-0126-SM-4WWE9 34.7
GTEX-13U4I-1626-SM-5IFFR 34.6
GTEX-13S86-0126-SM-5S2PI 34.1
GTEX-X585-1826-SM-4QAS3 32.2
GTEX-139YR-0426-SM-5IFFV 31.6
GTEX-Q734-0226-SM-48U1A 31.5
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

145.8

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 145.8
FF:10025-101D7 39,50,70 years, male 145.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.