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SRP54

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26.9TPM
GTEx:14.9RPKM
FANTOM5:45.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA048977

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA048977

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

26.9
N/A Female, age 80
Sample 1
TPM: 24.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 20.3
N/A Female, age 57
Sample 3
TPM: 20.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 39.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 30.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.1
Samples: 350

Max RPKM: 26.2
Min RPKM: 10.7
Std RPKM: 2
Median RPKM: 14.9
GTEX-ZYY3-0226-SM-5E45M 26.2
GTEX-QDT8-0226-SM-32PL4 21.8
GTEX-11H98-0226-SM-5NQ89 21.6
GTEX-11EMC-2826-SM-5PNY6 20.9
GTEX-14C39-2526-SM-5S2UH 20.6
GTEX-QEG5-0326-SM-2S1PB 20.6
GTEX-T2IS-0226-SM-32QPH 20.5
GTEX-13FHO-0326-SM-5IJBH 20.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.6
Samples: 227

Max RPKM: 28.2
Min RPKM: 9.3
Std RPKM: 2.3
Median RPKM: 14.5
GTEX-11WQK-1526-SM-5EGKN 28.2
GTEX-1128S-0926-SM-5GZZU 24.4
GTEX-ZAJG-1626-SM-5HL7I 21.5
GTEX-ZZPU-0326-SM-5N9BJ 21.5
GTEX-ZYW4-2226-SM-5GZYG 20.5
GTEX-Y114-1326-SM-4TT9A 20.0
GTEX-133LE-0926-SM-5P9J1 19.5
GTEX-Y5LM-0826-SM-4VDSW 19.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

45.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 45.7
FF:10010-101C1 65,65,76 years, mixed 45.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.