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SRP54
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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:37.9TPM
GTEx:17.5RPKM
FANTOM5:94.5Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:High
 

Antibody staining

Antibody HPA048977

 

Cells in glomeruli

Not detected  

Cells in tubules

High  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

37.9

overview Female, age 58
Sample 1
TPM: 38.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 31.1
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 35.5
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 28.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 32.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 43.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 31.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 48.9
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 50.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

17.5

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 17.5
Samples: 32

Max RPKM: 25.4
Min RPKM: 7.2
Std RPKM: 4.1
Median RPKM: 18
GTEX-12696-0926-SM-5FQTV 25.4
GTEX-QLQW-1626-SM-4R1K1 24.5
GTEX-11TTK-1926-SM-5PNW8 23.9
GTEX-ZYFG-1626-SM-5GZYY 22.6
GTEX-145MN-0326-SM-5QGQI 22.3
GTEX-XPVG-0526-SM-4B65N 20.9
GTEX-12WSG-0826-SM-5EQ5A 20.4
GTEX-ZLFU-0926-SM-5P9F8 20.3
GTEX-13OVI-1126-SM-5KLZF 20.3
GTEX-13NYB-1726-SM-5N9G2 20.0
GTEX-QDVN-1626-SM-48TZC 19.7
GTEX-147F4-2626-SM-5Q5CS 19.0
GTEX-1497J-0826-SM-5NQAJ 19.0
GTEX-1399S-0526-SM-5IJG8 18.7
GTEX-N7MS-1626-SM-3LK5F 18.2
GTEX-ZYT6-2226-SM-5GIC9 18.1
GTEX-UPIC-1126-SM-4IHLO 17.8
GTEX-ZVZP-0926-SM-5GIDB 17.6
GTEX-13RTJ-2226-SM-5S2Q1 17.5
GTEX-13O1R-2526-SM-5N9FW 17.1
GTEX-Y5V6-2026-SM-5IFHO 16.8
GTEX-P4QS-1126-SM-3NMD5 16.1
GTEX-T5JC-1526-SM-4DM68 15.3
GTEX-13OVL-1826-SM-5KLZR 14.3
GTEX-ZC5H-1726-SM-5HL7X 14.0
GTEX-RN64-1626-SM-48FD7 13.7
GTEX-11GS4-2326-SM-5A5KS 13.3
GTEX-13112-2126-SM-5GCO4 12.8
GTEX-NPJ8-2226-SM-3TW8D 11.5
GTEX-13OW6-1826-SM-5N9F9 11.5
GTEX-11OF3-1326-SM-5N9FJ 11.3
GTEX-ZYFD-1526-SM-5NQ7T 7.2
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

94.5

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 94.5
FF:10017-101C8 60,62,63 years, female 94.5

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