Tissue expression of PRPF6 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	43.6	TPM
GTEx:	35.6	RPKM
FANTOM5:	62.5	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	Medium
Myoepithelial cells:	Medium

Antibody staining	Antibody HPA047106
Adipocytes	Not detected
Glandular cells	Medium
Myoepithelial cells	Medium

BREAST - HPA RNA-seq

Average TPM	43.6

Female, age 52

Sample 1
TPM: 47.2

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 42.8

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 45.3

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 39.2

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	35.6

GTEx sample id

RPKM

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 35.6

Samples: 214

Max RPKM: 56.1
Min RPKM: 19
Std RPKM: 7.4
Median RPKM: 34.7

GTEX-13FTY-2226-SM-5J1ND

56.1

GTEX-139TU-0626-SM-5KM3X

54.8

GTEX-131YS-0626-SM-5EGKL

53.8

GTEX-132Q8-1426-SM-5EGK7

53.2

GTEX-ZXES-0826-SM-5E43C

52.8

GTEX-11EM3-1326-SM-5N9C6

52.7

GTEX-11EMC-2026-SM-5A5JV

51.0

GTEX-131XW-0726-SM-5EGK3

50.4

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	62.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 62.5

FF:10080-102A8

77 years, female

62.5