Tissue expression of PRPF6 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	70.1	TPM
GTEx:	27.4	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Low
Neuronal cells:	Medium
Neuropil:	Not detected

Antibody staining	Antibody HPA047106
Endothelial cells	Low
Glial cells	Low
Neuronal cells	Medium
Neuropil	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	70.1

Male, age 5

Sample 1
TPM: 58.9

Female, age 40

Sample 2
TPM: 97.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 54.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	27.4

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 27.4

Samples: 114

Max RPKM: 63.3
Min RPKM: 15.1
Std RPKM: 6.1
Median RPKM: 27.7

GTEX-11OF3-2926-SM-5HL78

63.3

GTEX-NPJ8-1526-SM-2D7VU

43.0

GTEX-13FXS-3126-SM-5J2NN

41.4

GTEX-12ZZY-3026-SM-5GCOU

39.0

GTEX-13FHO-3026-SM-5J1O9

38.1

GTEX-X585-3026-SM-46MWF

37.9

GTEX-144FL-3026-SM-5O99C

36.4

GTEX-132Q8-3026-SM-5PNVG

34.4

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 27.4

Samples: 108

Max RPKM: 57.9
Min RPKM: 11.2
Std RPKM: 7
Median RPKM: 27.7

GTEX-13N2G-0011-R10a-SM-5MR34

57.9

GTEX-13NYS-0011-R10a-SM-5MR4S

49.0

GTEX-NPJ8-0011-R10A-SM-2YUMO

39.6

GTEX-X585-0011-R10A-SM-46MUY

38.3

GTEX-13OW7-0011-R10a-SM-5L3H3

37.7

GTEX-13CZV-0011-R10b-SM-5LZYD

37.6

GTEX-13X6K-0011-R10a-SM-5P9JR

37.6

GTEX-13SLX-0011-R10a-SM-5P9HV

36.6

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue