We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PRPF6
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:29.2TPM
GTEx:27.1RPKM
FANTOM5:94.0Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Medium
Cells in tubules:Medium
 

Antibody staining

Antibody HPA047106

 

Cells in glomeruli

Medium  

Cells in tubules

Medium  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

29.2

overview Female, age 58
Sample 1
TPM: 38.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 29.2
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 49.8
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 38.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 11.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 25.9
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 20.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 32.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 16.0
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

27.1

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 27.1
Samples: 32

Max RPKM: 43.9
Min RPKM: 9.3
Std RPKM: 8.6
Median RPKM: 26.7
GTEX-13OVI-1126-SM-5KLZF 43.9
GTEX-ZLFU-0926-SM-5P9F8 40.8
GTEX-ZVZP-0926-SM-5GIDB 39.6
GTEX-1399S-0526-SM-5IJG8 38.7
GTEX-12696-0926-SM-5FQTV 36.0
GTEX-QLQW-1626-SM-4R1K1 35.2
GTEX-145MN-0326-SM-5QGQI 35.2
GTEX-ZYFG-1626-SM-5GZYY 34.3
GTEX-147F4-2626-SM-5Q5CS 34.0
GTEX-13112-2126-SM-5GCO4 32.3
GTEX-11TTK-1926-SM-5PNW8 31.9
GTEX-RN64-1626-SM-48FD7 31.6
GTEX-UPIC-1126-SM-4IHLO 31.0
GTEX-ZYT6-2226-SM-5GIC9 30.9
GTEX-XPVG-0526-SM-4B65N 27.8
GTEX-12WSG-0826-SM-5EQ5A 27.4
GTEX-13RTJ-2226-SM-5S2Q1 26.0
GTEX-13OVL-1826-SM-5KLZR 25.6
GTEX-1497J-0826-SM-5NQAJ 25.3
GTEX-QDVN-1626-SM-48TZC 24.7
GTEX-P4QS-1126-SM-3NMD5 24.0
GTEX-13NYB-1726-SM-5N9G2 22.6
GTEX-Y5V6-2026-SM-5IFHO 22.1
GTEX-N7MS-1626-SM-3LK5F 22.0
GTEX-11GS4-2326-SM-5A5KS 20.3
GTEX-ZC5H-1726-SM-5HL7X 18.8
GTEX-13O1R-2526-SM-5N9FW 18.5
GTEX-11OF3-1326-SM-5N9FJ 16.3
GTEX-13OW6-1826-SM-5N9F9 15.7
GTEX-T5JC-1526-SM-4DM68 15.4
GTEX-NPJ8-2226-SM-3TW8D 11.7
GTEX-ZYFD-1526-SM-5NQ7T 9.3
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

94.0

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 94.0
FF:10017-101C8 60,62,63 years, female 94.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.