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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:573.3TPM
GTEx:180.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:High
 

Antibody staining

Antibody HPA002858

 

Antibody CAB000076

 

Antibody CAB055505

 

Endothelial cells

Not detected   Low   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Medium  

Neuropil

High   High   High  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

573.3

N/A Male, age 5
Sample 1
TPM: 883.1
overview Female, age 40
Sample 2
TPM: 193.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 643.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

180.6

GTEx sample id

RPKM

95.9156.6204.825.2299.3020406080100120140160180200220240260280
 
95.9156.6204.825.2299.3020406080100120140160180200220240260280

Brain - Cortex

Brain - Cortex
RPKM: 155.7
Samples: 114

Max RPKM: 299.3
Min RPKM: 25.2
Std RPKM: 67.4
Median RPKM: 156.6
GTEX-T5JC-2426-SM-3NMDB 299.3
GTEX-12ZZX-2926-SM-5GCOQ 291.8
GTEX-Z93S-2926-SM-57WB9 283.8
GTEX-11DXY-3226-SM-5GIDE 282.0
GTEX-WHSE-3026-SM-3P5ZH 280.5
GTEX-WL46-2926-SM-3LK82 266.7
GTEX-12WSC-3026-SM-5GCNF 265.7
GTEX-14BMV-3026-SM-5S2PQ 262.6
GTEX-117XS-3026-SM-5N9CA 256.4
GTEX-WVLH-3026-SM-3MJG9 251.8
GTEX-1313W-3126-SM-5LZUI 250.3
GTEX-11ZUS-2926-SM-5FQSL 245.9
GTEX-145MH-3026-SM-5Q5DZ 245.5
GTEX-12126-1026-SM-5P9JJ 245.0
GTEX-YFC4-3126-SM-5PNV6 241.1
GTEX-13FXS-3126-SM-5J2NN 240.6
GTEX-13SLX-3126-SM-5S2Q5 239.9
GTEX-13VXU-2926-SM-5LU5C 237.3
GTEX-ZYFD-3026-SM-5E44C 229.3
GTEX-WZTO-2926-SM-3NM9I 228.2
GTEX-13FLW-1426-SM-5K7YE 223.1
GTEX-T6MN-2626-SM-32PMQ 216.9
GTEX-11NUK-2926-SM-5A5MD 215.5
GTEX-ZUA1-3026-SM-59HJC 213.8
GTEX-13OVH-3026-SM-5MR4N 212.2
GTEX-13OW6-3026-SM-5J2MI 210.8
GTEX-11PRG-2926-SM-5987A 210.5
GTEX-RNOR-2326-SM-2TF4I 208.7
GTEX-XOTO-3026-SM-4B65M 205.8
GTEX-145LS-3126-SM-5Q5BY 201.7
GTEX-131YS-3126-SM-5KLYT 201.2
GTEX-13O3Q-2926-SM-5KM45 200.3
GTEX-145MF-2726-SM-5O995 196.0
GTEX-PVOW-2526-SM-2XCF7 194.9
GTEX-WWYW-3126-SM-3NB39 191.4
GTEX-ZAK1-3026-SM-5S2MJ 190.4
GTEX-Q2AG-2926-SM-2HMJ3 187.7
GTEX-12ZZY-3026-SM-5GCOU 186.5
GTEX-1399T-3026-SM-5KLZC 184.6
GTEX-T2IS-3026-SM-32QPM 182.9
GTEX-X585-3026-SM-46MWF 182.5
GTEX-13O3O-3126-SM-5KM3H 180.8
GTEX-R55F-1326-SM-5S2V4 179.8
GTEX-14ASI-3026-SM-5S2PN 179.0
GTEX-13NYC-2826-SM-5K7WR 178.7
GTEX-13FHO-3026-SM-5J1O9 175.5
GTEX-11GSO-2926-SM-5HL73 175.1
GTEX-QVJO-1426-SM-2S1QY 174.9
GTEX-YJ89-3026-SM-5IFJI 172.7
GTEX-11ONC-2926-SM-5P9JM 170.0
GTEX-11DXW-1126-SM-5H12Q 169.8
GTEX-13NYB-3026-SM-5IJD7 167.8
GTEX-145MG-3026-SM-5RQJA 164.9
GTEX-144GL-3026-SM-5Q5CW 164.2
GTEX-X4XX-3026-SM-3NMB2 159.7
GTEX-Y8DK-0826-SM-4TT3T 159.3
GTEX-Y111-2726-SM-4TT3N 156.7
GTEX-XLM4-3026-SM-4AT6L 156.4
GTEX-13FHP-3026-SM-5IJBS 153.9
GTEX-132Q8-3026-SM-5PNVG 152.7
GTEX-13NYS-3126-SM-5KLYV 151.3
GTEX-ZVT3-3026-SM-5E43N 148.4
GTEX-13OW8-2826-SM-5L3GC 145.7
GTEX-11OF3-2926-SM-5HL78 144.8
GTEX-11GS4-3126-SM-5A5LH 144.5
GTEX-12WSH-3026-SM-5CVNI 144.3
GTEX-UTHO-3026-SM-3GAFB 143.9
GTEX-TSE9-3026-SM-3DB76 143.1
GTEX-111FC-3126-SM-5GZZ2 139.2
GTEX-1128S-2726-SM-5H12C 132.6
GTEX-12ZZZ-3026-SM-5BC67 128.1
GTEX-RU72-3026-SM-5SI7Y 128.0
GTEX-13PL6-3126-SM-5LUAR 127.0
GTEX-1192X-3126-SM-5N9BY 126.3
GTEX-QMR6-1426-SM-32PLA 126.3
GTEX-11OC5-0726-SM-5P9JK 126.0
GTEX-13X6J-3026-SM-5Q5CU 125.1
GTEX-13QIC-2926-SM-5J2NF 117.7
GTEX-14A5I-2926-SM-5Q5CQ 116.4
GTEX-11WQK-3026-SM-5EQL6 109.9
GTEX-ZAJG-3126-SM-5HL9J 108.4
GTEX-NPJ8-1526-SM-2D7VU 103.9
GTEX-ZE7O-3126-SM-5HL5X 98.1
GTEX-13PVQ-3026-SM-5SI93 96.8
GTEX-QDT8-2926-SM-32PKC 96.0
GTEX-13S7M-3126-SM-5RQJQ 95.9
GTEX-11EI6-3026-SM-5GZZO 95.7
GTEX-QVUS-2826-SM-3GADB 94.1
GTEX-11EMC-3226-SM-5EGKW 93.5
GTEX-12ZZW-2926-SM-5LZUP 92.8
GTEX-OXRN-2426-SM-2I5EQ 88.6
GTEX-131XW-3126-SM-5LZUC 87.0
GTEX-ZZPT-3026-SM-5GZXH 86.6
GTEX-11O72-2926-SM-5BC4V 85.3
GTEX-12WSD-3126-SM-5HL7P 79.3
GTEX-NPJ7-2726-SM-2I3FT 78.7
GTEX-13JVG-3126-SM-5L3FH 78.4
GTEX-1117F-3226-SM-5N9CT 76.9
GTEX-13OVJ-2826-SM-5L3GW 76.3
GTEX-13OW7-3026-SM-5L3GY 72.6
GTEX-13X6K-2926-SM-5Q5D5 69.7
GTEX-13JUV-2926-SM-5LZX7 66.1
GTEX-147GR-3026-SM-5S2ML 65.9
GTEX-N7MT-1126-SM-5SI7V 65.9
GTEX-144FL-3026-SM-5O99C 63.0
GTEX-13G51-3026-SM-5IJB8 62.8
GTEX-139T8-1026-SM-5J2MC 62.6
GTEX-11GSP-3226-SM-5986O 59.6
GTEX-11NV4-2126-SM-5N9DS 54.7
GTEX-11TTK-2926-SM-5PNYP 47.1
GTEX-PWO3-0926-SM-2I5EY 39.1
GTEX-1445S-3026-SM-5O9BR 28.5
GTEX-13IVO-2926-SM-5L3CZ 28.0
GTEX-12WSA-2926-SM-5EQ4D 25.2
Show all
109.0218.4292.126.7449.0050100150200250300350400
 
109.0218.4292.126.7449.0050100150200250300350400

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 207.0
Samples: 108

Max RPKM: 449
Min RPKM: 26.7
Std RPKM: 106.7
Median RPKM: 218.4
GTEX-12WSE-0011-R10b-SM-5P9JV 449.0
GTEX-131XH-0011-R10a-SM-5EGLJ 399.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 383.3
GTEX-1313W-0011-R10b-SM-5DUXA 378.8
GTEX-145MH-0011-R10b-SM-5PNUK 375.9
GTEX-13SLX-0011-R10a-SM-5P9HV 365.0
GTEX-13O3Q-0011-R10b-SM-5KM39 363.8
GTEX-WZTO-0011-R10B-SM-4E3KB 360.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 351.8
GTEX-145MG-0011-R10a-SM-5PNWG 347.6
GTEX-T5JC-0011-R10A-SM-32PM2 337.8
GTEX-14BIN-0011-R10a-SM-5S2UA 334.6
GTEX-131YS-0011-R10b-SM-5EQ5N 330.3
GTEX-T6MN-0011-R10A-SM-32QP7 326.9
GTEX-WL46-0011-R10A-SM-3MJFQ 326.7
GTEX-13X6J-0011-R10b-SM-5PNWA 326.4
GTEX-13OW7-0011-R10a-SM-5L3H3 325.7
GTEX-12WSC-0011-R10a-SM-5GU57 325.1
GTEX-NL3H-0011-R10A-SM-2I3E9 321.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 320.4
GTEX-WVLH-0011-R10A-SM-3MJFM 319.8
GTEX-13NYB-0011-R10a-SM-5KM43 307.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 306.5
GTEX-X585-0011-R10A-SM-46MUY 304.3
GTEX-13X6K-0011-R10a-SM-5P9JR 299.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 293.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 292.5
GTEX-12WSF-0011-R10a-SM-5LZVH 292.0
GTEX-13N1W-0011-R10b-SM-5MR4H 291.4
GTEX-YFC4-0011-R10a-SM-4SOK5 290.9
GTEX-13NYS-0011-R10a-SM-5MR4S 288.6
GTEX-13FLW-0011-R10b-SM-5LZZF 269.5
GTEX-S7SE-0011-R10A-SM-2XCDF 268.2
GTEX-13O3O-0011-R10a-SM-5LUA9 267.7
GTEX-13QIC-0011-R10a-SM-5O9C7 267.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 265.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 265.7
GTEX-11H98-0011-R10b-SM-5NQ98 265.4
GTEX-N7MS-0011-R10A-SM-2HMJK 264.4
GTEX-13OW6-0011-R10a-SM-5L3HE 263.7
GTEX-147GR-0011-R10b-SM-5S2UM 263.2
GTEX-145LS-0011-R10a-SM-5PNUQ 259.3
GTEX-12WSM-0011-R10a-SM-5DUWV 256.4
GTEX-13OVL-0011-R10a-SM-5L3GS 254.2
GTEX-13S7M-0011-R10b-SM-5PNZB 249.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 247.9
GTEX-Z93S-0011-R10a-SM-4RGNM 244.6
GTEX-13FXS-0011-R10a-SM-5J2MA 240.2
GTEX-13CZV-0011-R10b-SM-5LZYD 235.0
GTEX-13FHO-0011-R10b-SM-5J2MM 232.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 232.1
GTEX-YJ89-0011-R10a-SM-4SOK9 228.6
GTEX-12WSH-0011-R10a-SM-5LZUS 225.7
GTEX-WWYW-0011-R10A-SM-3NB35 222.2
GTEX-XLM4-0011-R10A-SM-4AT5P 214.6
GTEX-ZF28-0011-R10a-SM-4WWEH 208.6
GTEX-13X6I-0011-R10a-SM-5PNWI 207.2
GTEX-NPJ8-0011-R10A-SM-2YUMO 206.7
GTEX-N7MT-0011-R10A-SM-2I3E1 203.6
GTEX-14BIL-0011-R10a-SM-5SI75 195.8
GTEX-ZUA1-0011-R10a-SM-51MT6 193.6
GTEX-13QJC-0011-R10a-SM-5SI63 192.7
GTEX-X4XX-0011-R10B-SM-46MWO 191.6
GTEX-13G51-0011-R10b-SM-5LZYF 188.8
GTEX-147F4-0011-R10b-SM-5S2WC 180.4
GTEX-12126-0011-R10b-SM-5BC6T 179.6
GTEX-145LU-0011-R10a-SM-5PNWJ 174.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 169.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 168.4
GTEX-QMR6-0011-R10A-SM-32PKO 163.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 160.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 153.4
GTEX-QDT8-0011-R10A-SM-32PKG 148.3
GTEX-ZVT3-0011-R10b-SM-57WB6 143.3
GTEX-X4EP-0011-R10B-SM-4QASJ 138.4
GTEX-13OW8-0011-R10a-SM-5L3H6 134.4
GTEX-QVUS-0011-R10A-SM-3GIK3 134.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 125.7
GTEX-13JUV-0011-R10b-SM-5LZXR 117.8
GTEX-TSE9-0011-R10A-SM-3DB7O 110.8
GTEX-OXRN-0011-R10A-SM-2I5GC 109.6
GTEX-RVPU-0011-R10A-SM-2XCAH 107.1
GTEX-P44H-0011-R10A-SM-2XCEK 106.7
GTEX-11ZUS-0011-R10b-SM-5BC79 105.0
GTEX-ZXG5-0011-R10a-SM-57WDD 91.1
GTEX-13NZA-0011-R10b-SM-5KM54 87.4
GTEX-11WQC-0011-R10a-SM-57WCT 87.1
GTEX-11WQK-0011-R10a-SM-5BC6R 86.2
GTEX-13N2G-0011-R10a-SM-5MR34 84.6
GTEX-13SLW-0011-R10a-SM-5S2UI 79.3
GTEX-NL4W-0011-R10A-SM-2I3DY 75.4
GTEX-X261-0011-R10B-SM-4E3JT 73.1
GTEX-139TS-0011-R10a-SM-5K7TU 66.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 66.4
GTEX-12WSD-0011-R10b-SM-5GU79 65.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 62.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 53.8
GTEX-OXRO-0011-R10A-SM-2I5EH 48.5
GTEX-14753-0011-R10b-SM-5S2WE 45.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 44.8
GTEX-XMD1-0011-R10A-SM-4AT4A 43.2
GTEX-12WSA-0011-R10b-SM-5P9ET 39.1
GTEX-131XW-0011-R10a-SM-5DUVA 37.0
GTEX-1477Z-0011-R10b-SM-5S2RF 36.1
GTEX-13JVG-0011-R10b-SM-5KM2P 36.0
GTEX-13IVO-0011-R10a-SM-5LZY3 31.1
GTEX-ZV68-0011-R10a-SM-51MT7 30.0
GTEX-1445S-0011-R10a-SM-5PNWB 26.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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