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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.3TPM
GTEx:14.4RPKM
FANTOM5:60.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA029849

  

Antibody HPA029852

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Low   Medium  

Fibroblasts

 Not detected   Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA029849

  

Antibody HPA029852

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

32.3
N/A Female, age 80
Sample 1
TPM: 35.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 24.0
N/A Female, age 57
Sample 3
TPM: 23.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 38.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 40.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.4
Samples: 350

Max RPKM: 49
Min RPKM: 8.6
Std RPKM: 3.6
Median RPKM: 13.8
GTEX-ZYVF-0226-SM-5GIEG 49.0
GTEX-13NYS-0226-SM-5MR49 33.3
GTEX-XMD2-0226-SM-4WWEE 31.6
GTEX-111VG-2326-SM-5N9BK 31.4
GTEX-POYW-0726-SM-2XCEO 27.2
GTEX-11UD1-0226-SM-5EQKL 25.6
GTEX-13JVG-0226-SM-5J1MW 24.7
GTEX-11GSO-2326-SM-5A5LX 23.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.4
Samples: 227

Max RPKM: 44.6
Min RPKM: 9.2
Std RPKM: 3.7
Median RPKM: 13.8
GTEX-ZYVF-1026-SM-5E44V 44.6
GTEX-13OVH-1126-SM-5K7YP 35.7
GTEX-11PRG-1526-SM-5HL6Z 24.4
GTEX-X8HC-2326-SM-4QAS4 24.3
GTEX-13FHO-2026-SM-5J1OA 23.8
GTEX-13PL7-1226-SM-5SIAR 22.3
GTEX-1128S-0926-SM-5GZZU 22.2
GTEX-UPK5-1826-SM-3GAEB 20.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

60.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 60.0
FF:10010-101C1 65,65,76 years, mixed 60.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.