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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:60.7RPKM
FANTOM5:282.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA003103

 

Antibody HPA037536

 

Glial cells

Not detected   Not detected  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

60.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 60.7
Samples: 117

Max RPKM: 111.1
Min RPKM: 15.1
Std RPKM: 23.1
Median RPKM: 63
GTEX-13G51-0011-R5a-SM-5L3EB 111.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 102.0
GTEX-UTHO-0011-R5A-SM-3GIJD 101.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 101.2
GTEX-TSE9-0011-R5A-SM-3DB7J 101.2
GTEX-11GSP-0011-R5a-SM-57WBE 99.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 98.8
GTEX-131YS-0011-R5b-SM-5K7YB 96.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 96.0
GTEX-N7MT-0011-R5a-SM-2I3G6 95.8
GTEX-T6MN-0011-R5A-SM-32QPD 92.6
GTEX-13SLX-0011-R5a-SM-5O9BV 91.7
GTEX-14BIM-0011-R5b-SM-5S2RM 90.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 90.3
GTEX-132Q8-0011-R5a-SM-5IJDM 87.7
GTEX-N7MS-0011-R5a-SM-2HMK8 87.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 87.0
GTEX-13X6K-0011-R5b-SM-5PNUE 86.7
GTEX-P44H-0011-R5A-SM-2XCEX 85.6
GTEX-12WSC-0011-R5b-SM-5CVNS 85.4
GTEX-1313W-0011-R5b-SM-5L3EP 85.4
GTEX-145LS-0011-R5a-SM-5SI65 84.3
GTEX-145MH-0011-R5a-SM-5P9JT 83.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 81.2
GTEX-11H98-0011-R5b-SM-57WCF 80.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 80.3
GTEX-13VXU-0011-R5a-SM-5O9D7 80.1
GTEX-QVJO-0011-R5A-SM-2S1QM 79.3
GTEX-X585-0011-R5A-SM-46MVI 78.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 77.9
GTEX-RU72-0011-R5A-SM-2TF6U 75.9
GTEX-13X6J-0011-R5b-SM-5PNWT 75.0
GTEX-13FXS-0011-R5b-SM-5LZYE 74.7
GTEX-13FLW-0011-R5a-SM-5LZX6 73.9
GTEX-13NYS-0011-R5a-SM-5MR4D 73.8
GTEX-S7SE-0011-R5A-SM-2XCDA 72.9
GTEX-1399T-0011-R5b-SM-5IJDK 72.5
GTEX-13OW6-0011-R5a-SM-5O9BK 71.9
GTEX-WZTO-0011-R5B-SM-3NMC5 71.7
GTEX-RVPV-0011-R5A-SM-2TF69 71.2
GTEX-13OVL-0011-R5b-SM-5L3FU 70.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 69.7
GTEX-13O3O-0011-R5b-SM-5KM44 69.6
GTEX-WVLH-0011-R5A-SM-3MJFW 69.5
GTEX-ZUA1-0011-R5b-SM-51MTG 69.5
GTEX-13S7M-0011-R5b-SM-5P9HS 68.3
GTEX-14ABY-0011-R5b-SM-5SI7B 67.7
GTEX-OHPN-0011-R5A-SM-2I5FF 67.0
GTEX-13OW5-0011-R5b-SM-5L3FR 66.8
GTEX-13JUV-0011-R5a-SM-5LZY5 66.5
GTEX-11OF3-0011-R5a-SM-57WB4 65.9
GTEX-13CZV-0011-R5a-SM-5K7XA 65.9
GTEX-13X6I-0011-R5a-SM-5PNWW 65.8
GTEX-XMD1-0011-R5A-SM-4AT47 65.4
GTEX-12WSF-0011-R5a-SM-5HL8K 64.1
GTEX-13OW7-0011-R5b-SM-5O9DM 63.8
GTEX-139TT-0011-R5b-SM-5K7W8 63.1
GTEX-RVPU-0011-R5A-SM-2XCAD 63.0
GTEX-T5JC-0011-R5A-SM-32PLK 63.0
GTEX-WWYW-0011-R5A-SM-3NB3E 63.0
GTEX-WL46-0011-R5A-SM-3LK6V 62.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 62.3
GTEX-11NV4-0011-R5a-SM-5NQ88 61.4
GTEX-T2IS-0011-R5A-SM-32QP4 60.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60.1
GTEX-R55E-0011-R5A-SM-2TC5N 59.6
GTEX-13OVH-0011-R5b-SM-5KM4L 58.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 57.6
GTEX-13JVG-0011-R5a-SM-5MR4O 57.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 56.9
GTEX-13NYB-0011-R5a-SM-5MR45 56.8
GTEX-13FLV-0011-R5a-SM-5LZWT 56.3
GTEX-NL4W-0011-R5a-SM-2I3GD 53.4
GTEX-XOTO-0011-R5A-SM-4B657 53.4
GTEX-12WSD-0011-R5b-SM-5CVNG 52.8
GTEX-NL3H-0011-R5a-SM-2I3GB 52.7
GTEX-ZE7O-0011-R5a-SM-57WBO 52.4
GTEX-PVOW-0011-R5A-SM-32PL7 52.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 49.5
GTEX-12WSB-0011-R5b-SM-5GU67 46.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 46.2
GTEX-OXRN-0011-R5A-SM-2I5EF 46.1
GTEX-Z93S-0011-R5b-SM-4RGNI 46.0
GTEX-QMR6-0011-R5A-SM-32PKT 45.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 44.7
GTEX-ZXG5-0011-R5b-SM-57WBN 44.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 43.8
GTEX-14BIN-0011-R5b-SM-5SI78 39.2
GTEX-YFC4-0011-R5a-SM-4RGLR 39.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 39.0
GTEX-X4XX-0011-R5A-SM-46MWN 38.5
GTEX-12ZZX-0011-R5a-SM-5HL89 36.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 36.6
GTEX-13CIG-0011-R5b-SM-5L3F2 36.4
GTEX-144GO-0011-R5a-SM-5PNUR 35.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 33.8
GTEX-YJ89-0011-R5a-SM-4V6GM 33.2
GTEX-X261-0011-R5A-SM-3NMB4 32.8
GTEX-12WSH-0011-R5b-SM-5P9F3 32.6
GTEX-1445S-0011-R5a-SM-5PNUS 32.1
GTEX-139TS-0011-R5b-SM-5J2MZ 31.2
GTEX-12WSA-0011-R5b-SM-5GU5I 29.4
GTEX-ZV68-0011-R5a-SM-4YCDW 28.4
GTEX-ZVT3-0011-R5a-SM-51MSI 27.3
GTEX-NPJ7-0011-R5a-SM-33HBK 26.4
GTEX-11WQC-0011-R5a-SM-5BC74 26.0
GTEX-144GL-0011-R5b-SM-5PNUJ 26.0
GTEX-13FHP-0011-R5b-SM-5LZY2 25.7
GTEX-13112-0011-R5b-SM-5DUV8 25.0
GTEX-139T8-0011-R5b-SM-5J1MO 24.0
GTEX-13CF2-0011-R5a-SM-5LZWS 22.8
GTEX-S7PM-0011-R5A-SM-3NM8G 21.4
GTEX-11UD1-0011-R5b-SM-5P9FP 20.6
GTEX-1477Z-0011-R5b-SM-5PNUO 20.6
GTEX-145MG-0011-R5b-SM-5S2VU 16.3
GTEX-13NZA-0011-R5b-SM-5KM4K 15.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

282.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 282.5
FF:10164-103B2 76 years, female 325.9
FF:10379-105H1 89 years, female 239.1

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