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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:47.6RPKM
FANTOM5:275.1Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA003103

 

Antibody HPA037536

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

47.6

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 47.6
Samples: 94

Max RPKM: 95.4
Min RPKM: 14.1
Std RPKM: 20.5
Median RPKM: 44.4
GTEX-WWYW-0011-R1A-SM-3TW8G 95.4
GTEX-X585-0011-R1B-SM-46MVE 92.0
GTEX-131XH-0011-R1a-SM-5DUWA 90.2
GTEX-XOTO-0011-R1B-SM-4B65C 89.5
GTEX-RNOR-0011-R1A-SM-5SI8F 86.9
GTEX-145MH-0011-R1b-SM-5PNWY 86.9
GTEX-N7MS-0011-R1a-SM-2HMJG 81.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 80.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 80.1
GTEX-13JUV-0011-R1a-SM-5LZY4 78.7
GTEX-WL46-0011-R1A-SM-3LK6M 76.9
GTEX-R55E-0011-R1A-SM-2TC6N 75.4
GTEX-TSE9-0011-R1A-SM-3DB7E 74.7
GTEX-13N1W-0011-R1b-SM-5MR4T 73.1
GTEX-139TT-0011-R1a-SM-5LZVD 72.9
GTEX-13O3O-0011-R1b-SM-5KM2K 72.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 71.9
GTEX-T5JC-0011-R1A-SM-32PM6 69.4
GTEX-13FLW-0011-R1b-SM-5LZX2 67.7
GTEX-13FXS-0011-R1a-SM-5K7U6 66.4
GTEX-12WSD-0011-R1b-SM-5LZVY 64.5
GTEX-13G51-0011-R1a-SM-5LZYR 62.7
GTEX-P44H-0011-R1A-SM-3NM8J 61.5
GTEX-QDT8-0011-R1A-SM-32PKS 61.5
GTEX-QVJO-0011-R1A-SM-2S1QI 57.9
GTEX-1313W-0011-R1b-SM-5EQ4A 57.8
GTEX-13FHO-0011-R1b-SM-5KLZG 57.0
GTEX-11ONC-0011-R1a-SM-57WD4 56.5
GTEX-PVOW-0011-R1A-SM-32PL6 55.7
GTEX-13OW7-0011-R1b-SM-5L3HF 55.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 54.6
GTEX-NPJ7-0011-R1a-SM-3GACT 54.3
GTEX-13X6I-0011-R1b-SM-5PNZC 53.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 52.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 52.7
GTEX-12WSE-0011-R1b-SM-5GU4V 52.4
GTEX-N7MT-0011-R1a-SM-5SI7S 51.8
GTEX-S7SE-0011-R1A-SM-2XCDE 50.8
GTEX-X4XX-0011-R1B-SM-3P622 50.5
GTEX-12WSF-0011-R1a-SM-5DUVI 50.4
GTEX-13NYB-0011-R1b-SM-5KM4F 50.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 50.3
GTEX-YFC4-0011-R1a-SM-4V6EH 50.0
GTEX-QVUS-0011-R1A-SM-3GAD2 46.7
GTEX-144GL-0011-R1a-SM-5PNZ5 46.6
GTEX-12WSH-0011-R1a-SM-5GU5V 45.2
GTEX-WVLH-0011-R1A-SM-4MVOK 45.0
GTEX-13N2G-0011-R1b-SM-5MR3G 43.8
GTEX-WZTO-0011-R1B-SM-3NMAR 43.7
GTEX-T6MN-0011-R1A-SM-32QOY 43.6
GTEX-132Q8-0011-R1a-SM-5EGLK 42.1
GTEX-14ASI-0011-R1b-SM-5S2TY 41.6
GTEX-13NYS-0011-R1b-SM-5MR55 41.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 40.2
GTEX-13PDP-0011-R1a-SM-5PNX5 40.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40.1
GTEX-12WSM-0011-R1a-SM-5LZW6 39.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 38.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 38.2
GTEX-145LS-0011-R1b-SM-5PNUP 38.1
GTEX-13OW5-0011-R1b-SM-5L3GE 37.8
GTEX-QMR6-0011-R1A-SM-32PKW 37.7
GTEX-PWO3-0011-R1A-SM-2I5EW 37.7
GTEX-13S7M-0011-R1b-SM-5PNZE 36.8
GTEX-1399T-0011-R1b-SM-5DUWN 34.6
GTEX-13SLW-0011-R1a-SM-5S2W7 34.6
GTEX-13OVL-0011-R1a-SM-5L3H5 34.2
GTEX-13QJC-0011-R1b-SM-5S2UU 32.6
GTEX-NL3H-0011-R1a-SM-48TDJ 32.5
GTEX-131YS-0011-R1a-SM-5DUXC 32.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 31.7
GTEX-XMD1-0011-R1A-SM-4AT4C 31.6
GTEX-13112-0011-R1b-SM-5HL7K 30.0
GTEX-13OW8-0011-R1a-SM-5L3HI 29.9
GTEX-11GSO-0011-R1b-SM-57WD3 29.0
GTEX-UTHO-0011-R1A-SM-3GIJO 28.6
GTEX-13JVG-0011-R1a-SM-5KM32 28.0
GTEX-139T8-0011-R1a-SM-5HL75 27.9
GTEX-11UD1-0011-R1b-SM-5BC7D 27.1
GTEX-YJ89-0011-R1a-SM-4RGLS 26.0
GTEX-12WSB-0011-R1b-SM-5P9EY 23.1
GTEX-13CF2-0011-R1a-SM-5LZY1 22.7
GTEX-13FHP-0011-R1b-SM-5K7XL 22.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 21.9
GTEX-1212Z-0011-R1b-SM-5BC72 21.3
GTEX-145LU-0011-R1a-SM-5Q5CE 20.5
GTEX-NPJ8-0011-R1a-SM-33HCB 20.4
GTEX-ZF28-0011-R1a-SM-4WWD1 19.9
GTEX-13NZA-0011-R1b-SM-5LUAF 19.4
GTEX-11ZTS-0011-R1a-SM-5BC71 18.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 18.6
GTEX-ZE7O-0011-R1a-SM-57WDM 15.2
GTEX-144GO-0011-R1a-SM-5PNWO 15.0
GTEX-13FTY-0011-R1a-SM-5LZXE 14.1
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

275.1

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 275.1
FF:10374-105G5 89 years, female 376.4
FF:10169-103B7 60 years, female 230.9
FF:10153-102I9 76 years, female 218.1

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