We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
GSPT1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:39.4TPM
GTEx:9.2RPKM
FANTOM5:97.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody HPA052488

 

Bile duct cells

Medium  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

39.4

N/A Female, age 60
Sample 1
TPM: 34.5
overview Male, age 54
Sample 2
TPM: 53.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 33.9
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 54.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 32.0
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 37.6
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 49.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 25.7
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 29.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 43.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 9.2
Samples: 119

Max RPKM: 20.1
Min RPKM: 3.4
Std RPKM: 2.8
Median RPKM: 8.5
GTEX-13NZ9-1326-SM-5MR3V 20.1
GTEX-S32W-1926-SM-4AD63 18.1
GTEX-12WSG-0626-SM-5FQTQ 16.7
GTEX-QDVN-0826-SM-48TZ2 15.5
GTEX-YB5E-0326-SM-5IFHU 15.2
GTEX-144GM-1326-SM-5LU5E 15.1
GTEX-Y5LM-0426-SM-4VBRO 15.0
GTEX-U3ZN-0226-SM-3DB8D 14.6
GTEX-ZPU1-0826-SM-57WG2 14.4
GTEX-X4XY-1626-SM-46MVN 14.1
GTEX-13O3O-1826-SM-5IFGW 13.9
GTEX-131XE-0326-SM-5LZVO 13.4
GTEX-13PVR-0126-SM-5S2PY 13.4
GTEX-146FH-1526-SM-5NQBU 13.4
GTEX-ZTPG-1426-SM-51MT3 13.0
GTEX-ZVT4-0626-SM-5E45T 12.7
GTEX-1497J-0726-SM-5Q5D1 12.6
GTEX-12WSL-0226-SM-5CVMJ 12.5
GTEX-YEC4-0826-SM-5P9FV 12.5
GTEX-S33H-1626-SM-4AD68 12.2
GTEX-RM2N-1926-SM-48FCU 12.0
GTEX-14C38-1526-SM-5RQJ7 11.7
GTEX-Z9EW-0426-SM-5CVM9 11.5
GTEX-ZF29-2026-SM-4WWB7 11.2
GTEX-11EQ9-0526-SM-5A5JZ 10.8
GTEX-X4EO-1126-SM-4QARQ 10.7
GTEX-UPIC-0926-SM-4IHLV 10.6
GTEX-VUSG-0126-SM-4KL1X 10.5
GTEX-13FTW-1126-SM-5J2NV 10.4
GTEX-QEL4-1226-SM-447A4 10.4
GTEX-YFC4-1526-SM-5IFJS 10.4
GTEX-13N11-0926-SM-5IJG2 10.3
GTEX-R53T-0326-SM-48FEC 10.3
GTEX-S4Z8-0526-SM-4AD4T 10.3
GTEX-RWSA-1426-SM-47JXA 10.2
GTEX-147F4-1426-SM-5LUA8 10.1
GTEX-P78B-1326-SM-3P611 10.1
GTEX-ZYY3-0626-SM-5NQ6W 10.1
GTEX-OOBJ-0826-SM-3NB2K 9.9
GTEX-TKQ2-1726-SM-4DXUP 9.8
GTEX-X4EP-1026-SM-4QAS5 9.6
GTEX-12696-0826-SM-5EGGE 9.5
GTEX-WQUQ-1926-SM-4OOSA 9.5
GTEX-1269C-0626-SM-5FQSS 9.4
GTEX-11WQC-0726-SM-5EQMR 9.3
GTEX-13113-1326-SM-5GCOI 9.3
GTEX-139YR-0226-SM-5IFEM 9.2
GTEX-ZVP2-0626-SM-51MSO 9.2
GTEX-12KS4-1326-SM-5LUB3 9.1
GTEX-UTHO-2426-SM-4JBHD 9.1
GTEX-X261-1726-SM-4PQYT 9.1
GTEX-147JS-1126-SM-5RQIW 9.0
GTEX-RU72-1426-SM-46MUF 9.0
GTEX-UPK5-1426-SM-4JBHH 9.0
GTEX-14A5I-1726-SM-5QGQ5 8.9
GTEX-Q734-0326-SM-48U15 8.7
GTEX-13N2G-0926-SM-5IFGJ 8.6
GTEX-14AS3-0126-SM-5Q5F4 8.6
GTEX-ZZPU-0426-SM-5GZYH 8.6
GTEX-145MO-2326-SM-5NQ9K 8.5
GTEX-REY6-1226-SM-48FDR 8.5
GTEX-12WSM-0726-SM-5GCOW 8.4
GTEX-13VXU-0926-SM-5IFFH 8.4
GTEX-QV44-0326-SM-4R1KD 8.4
GTEX-12WSI-0226-SM-5GCNA 8.3
GTEX-13FTZ-0726-SM-5IFFY 8.3
GTEX-QEG4-1826-SM-4R1JN 8.3
GTEX-QESD-2026-SM-447BI 8.2
GTEX-13QJC-0726-SM-5RQJK 8.1
GTEX-WFON-1726-SM-4LVMQ 8.1
GTEX-ZF2S-3026-SM-4WWCH 8.1
GTEX-14E1K-0326-SM-5S2PE 8.0
GTEX-X3Y1-2726-SM-4PQZH 8.0
GTEX-1399R-1226-SM-5P9GF 7.9
GTEX-T6MN-1226-SM-3NMA5 7.9
GTEX-139TU-0826-SM-5IJFG 7.8
GTEX-RTLS-1326-SM-46MUN 7.8
GTEX-Y5V5-0926-SM-4VBPZ 7.8
GTEX-1399T-0826-SM-5IFES 7.7
GTEX-PX3G-0826-SM-48TZS 7.7
GTEX-ZAB5-0426-SM-5CVMI 7.7
GTEX-11OF3-0726-SM-5BC4Z 7.5
GTEX-Q2AG-1126-SM-48U1P 7.4
GTEX-XOTO-0826-SM-4B65O 7.4
GTEX-WYVS-1926-SM-4PQZ2 7.3
GTEX-ZVT3-1626-SM-5GU66 7.3
GTEX-132NY-0926-SM-5P9G3 7.2
GTEX-11NV4-1326-SM-5HL6V 7.1
GTEX-13NYB-1026-SM-5IFH3 7.1
GTEX-YECK-1926-SM-4W21H 7.1
GTEX-11DXY-0526-SM-5EGGQ 7.0
GTEX-13NZB-0626-SM-5IFH6 7.0
GTEX-ZAB4-0826-SM-5LU9D 7.0
GTEX-11ZTS-1426-SM-5EQMM 6.9
GTEX-11ZUS-2526-SM-59872 6.9
GTEX-131YS-1626-SM-5HL6C 6.9
GTEX-11DXZ-0126-SM-5EGGY 6.8
GTEX-14DAQ-1726-SM-5S2R2 6.8
GTEX-ZYT6-0626-SM-5E45V 6.8
GTEX-13FLV-0326-SM-5N9DJ 6.7
GTEX-1212Z-0226-SM-59HLF 6.6
GTEX-SJXC-1226-SM-4DM78 6.6
GTEX-139TS-1426-SM-5IFJD 6.5
GTEX-XBEC-1526-SM-4AT68 6.5
GTEX-12WSD-1426-SM-5GCN9 6.4
GTEX-13112-1426-SM-5EGH8 6.4
GTEX-145MF-0826-SM-5QGQA 6.4
GTEX-11GSP-0626-SM-5986T 6.3
GTEX-14753-1626-SM-5NQ9L 6.3
GTEX-RN64-1826-SM-48FDV 6.3
GTEX-WZTO-0626-SM-4PQYY 6.3
GTEX-11ZVC-0726-SM-5FQT9 6.1
GTEX-13SLX-1226-SM-5S2Q6 6.1
GTEX-11NUK-1226-SM-5P9GM 5.8
GTEX-131XH-0626-SM-5LZWH 5.7
GTEX-13OW6-2626-SM-5IFF2 5.6
GTEX-145LU-1326-SM-5LU9N 5.6
GTEX-RNOR-1426-SM-48FDJ 5.4
GTEX-12ZZZ-1326-SM-59HKW 3.4
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

97.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 97.2
FF:10018-101C9 64,69,70 years, mixed 97.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.