Tissue expression of STX4 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	36.3	TPM
GTEx:	20.3	RPKM
FANTOM5:	23.1	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected

Antibody staining	Antibody HPA001330
Adipocytes	Not detected
Fibroblasts	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Low

Antibody staining	Antibody HPA001330
Adipocytes	Not detected
Fibroblasts	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	36.3

Female, age 80

Sample 1
TPM: 38.2

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 21.1

Female, age 57

Sample 3
TPM: 20.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 46.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 55.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	20.3

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 21.3

Samples: 350

Max RPKM: 73.4
Min RPKM: 8.9
Std RPKM: 7.2
Median RPKM: 20.1

GTEX-111VG-2326-SM-5N9BK

73.4

GTEX-XMD2-0226-SM-4WWEE

66.5

GTEX-13NYS-0226-SM-5MR49

58.2

GTEX-13JVG-0226-SM-5J1MW

54.6

GTEX-11EQ8-0226-SM-5EQ5G

49.5

GTEX-11UD1-0226-SM-5EQKL

46.9

GTEX-11GSO-2326-SM-5A5LX

41.9

GTEX-13FHO-0326-SM-5IJBH

41.3

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 18.8

Samples: 227

Max RPKM: 32.3
Min RPKM: 10.2
Std RPKM: 4.5
Median RPKM: 18.2

GTEX-Y114-1326-SM-4TT9A

32.3

GTEX-12584-2126-SM-5FQUM

31.8

GTEX-1192X-1526-SM-5H11I

31.6

GTEX-ZE7O-1526-SM-5J1NH

30.6

GTEX-139TU-1426-SM-5LZY9

29.3

GTEX-11WQK-1526-SM-5EGKN

29.1

GTEX-14A6H-1026-SM-5SIAZ

28.8

GTEX-U8XE-1926-SM-3DB98

28.6

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	23.1

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 23.1

FF:10010-101C1

65,65,76 years, mixed

23.1